Single Molecule Thermodynamic Penalties Applied to Enzymes by Whispering Gallery Mode Biosensors

Matthew C. Houghton, Nikita A. Toropov, Deshui Yu, Stefan Bagby, Frank Vollmer

Research output: Contribution to journalArticlepeer-review

2 Citations (SciVal)

Abstract

Optical microcavities, particularly whispering gallery mode (WGM) microcavities enhanced by plasmonic nanorods, are emerging as powerful platforms for single-molecule sensing. However, the impact of optical forces from the plasmonic near field on analyte molecules is inadequately understood. Using a standard optoplasmonic WGM single-molecule sensor to monitor two enzymes, both of which undergo an open-to-closed-to-open conformational transition, the work done on an enzyme by the WGM sensor as atoms of the enzyme move through the electric field gradient of the plasmonic hotspot during conformational change has been quantified. As the work done by the sensor on analyte enzymes can be modulated by varying WGM intensity, the WGM microcavity system can be used to apply free energy penalties to regulate enzyme activity at the single-molecule level. The findings advance the understanding of optical forces in WGM single-molecule sensing, potentially leading to the capability to precisely manipulate enzyme activity at the single-molecule level through tailored optical modulation.

Original languageEnglish
Article number2403195
JournalAdvanced Science
Volume11
Issue number35
Early online date12 Jul 2024
DOIs
Publication statusPublished - 18 Sept 2024

Data Availability Statement

The data that support the findings of this study are available in the sup-plementary material of this article

Funding

The authors thank Dr. J. Rubio and Professor J. Anders for their support and discussions surrounding this project and manuscript. The authors thank Dr. S. Pedireddy, Dr. T. Derrien, Dr. S. Subramanian, and Dr. C. Jones for useful discussions on methodology and analysis, and Dr. D. Mitchell and Dr. S. Frustaci for helpful insights on the fundamentals of 3PGK. M.H. thanks A. Elangovan for lab assistance. Funding is acknowledged by the authors from UKRI BBSRC SWBio DTP BB/T008741/1 (MH), UKRI BBSRC BB/Y512977/1 (FV) and UKRI EPSRC EP/T002875/1 (FV). For the purpose of open access, the author has applied a \u201CCreative Commons Attribution (CC BY)\u201D license to any Author Accepted Manuscript version arising from this submission.

FundersFunder number
UKRI BBSRCBB/Y512977/1
UKRI EPSRCEP/T002875/1

    Keywords

    • biosensors
    • enzymes
    • optical forces
    • optoplasmonics
    • peptides and proteins
    • plasmonics

    ASJC Scopus subject areas

    • Medicine (miscellaneous)
    • General Chemical Engineering
    • General Materials Science
    • Biochemistry, Genetics and Molecular Biology (miscellaneous)
    • General Engineering
    • General Physics and Astronomy

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