TY - JOUR
T1 - Sampling motif-constrained ensembles of networks
AU - Fisher, Rico
AU - Leitão, Jorge C.
AU - Peixoto, Tiago P.
AU - Altmann, Eduardo G.
PY - 2015/10/30
Y1 - 2015/10/30
N2 - The statistical significance of network properties is conditioned on null models which satisfy specified properties but that are otherwise random. Exponential random graph models are a principled theoretical framework to generate such constrained ensembles, but which often fail in practice, either due to model inconsistency, or due to the impossibility to sample networks from them. These problems affect the important case of networks with prescribed clustering coefficient or number of small connected subgraphs (motifs). In this paper we use the Wang-Landau method to obtain a multicanonical sampling that overcomes both these problems. We sample, in polynomial time, networks with arbitrary degree sequences from ensembles with imposed motifs counts. Applying this method to social networks, we investigate the relation between transitivity and homophily, and we quantify the correlation between different types of motifs, finding that single motifs can explain up to 60% of the variation of motif profiles.
AB - The statistical significance of network properties is conditioned on null models which satisfy specified properties but that are otherwise random. Exponential random graph models are a principled theoretical framework to generate such constrained ensembles, but which often fail in practice, either due to model inconsistency, or due to the impossibility to sample networks from them. These problems affect the important case of networks with prescribed clustering coefficient or number of small connected subgraphs (motifs). In this paper we use the Wang-Landau method to obtain a multicanonical sampling that overcomes both these problems. We sample, in polynomial time, networks with arbitrary degree sequences from ensembles with imposed motifs counts. Applying this method to social networks, we investigate the relation between transitivity and homophily, and we quantify the correlation between different types of motifs, finding that single motifs can explain up to 60% of the variation of motif profiles.
UR - http://dx.doi.org/10.1103/PhysRevLett.115.188701
U2 - 10.1103/PhysRevLett.115.188701
DO - 10.1103/PhysRevLett.115.188701
M3 - Article
SN - 0031-9007
VL - 115
JO - Physical Review Letters
JF - Physical Review Letters
IS - 18
M1 - 188701
ER -