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Endogenous retroviral elements LTR8B and MER65 rewire PSG9 regulation to control trophoblast syncytialization and pre-eclampsia risk

Manvendra Singh, Yuliang Qu, Amit Pande, Julianna Zadora, Florian Herse, Martin Gauster, Xuhui Kong, Rongyan Zheng, Rabia Anwar, Katarina Stevanovic, Ralf Dechend, Marie Cohen, Attila Molvarec, Jichang Wang, Miriam K. Konkel, Bin Zhang, Cedric Feschotte, Gabriela Dveksler, Sandra M. Blois, Laurence D. HurstZsuzsanna Izsvák

Research output: Contribution to journalArticlepeer-review

Abstract

Background
Understanding the causes of the exceptional rate of evolution of the mammalian placenta is likely to aid the understanding of placental development and the etiology of the human-specific pregnancy disorder pre-eclampsia (PE). As retroelements are often lineage-specific and known to be co-opted for placental function, here we consider the binding of the transcription factors GATA3 and DLX5 to retroelements. These factors are dysregulated in pre-eclampsia, as are their downstream consequences.

Results
We identify retrovirus-derived LTR8B as a placentally-relevant cis-regulatory element (CRE), not least within the PSG array, a primate-specific genomic region that exhibits high intraspecies variability. LTR8B at PSG9 is particularly influential affecting other PSG family members. Moreover, unique among PSGs, PSG9 produces both secreted and membrane-anchored isoforms. The retroelement MER65-int provides alternative polyA signals that enable the evolution of secreted PSG variants by truncating the ancestral CEACAM protein’s transmembrane domain. Functional characterization finds that LTR8B/PSG9 regulates the differentiation of multinucleated trophoblasts (syncytialization) and, like chorionic gonadotropin and syncytin1, determines the identity of syncytiotrophoblasts. Notably, PSG9 is the most upregulated PSG in PE, with levels correlated with GATA3 and DLX5 levels.

Conclusions
Retroelements contribute to the structural and expression evolution of PSG genes, facilitating lineage-specific placental evolution. The LTR8B/PSG9 regulatory network plays a central role in syncytiotrophoblast differentiation. Given the association between DLX5/GATA3 dysregulation and elevated PSG9 levels, along with PSG9’s expression in the first trimester, PSG9 shows potential as a predictive biomarker for preeclampsia.
Original languageEnglish
Article number73
Number of pages38
JournalGenome Biology
Volume27
Issue number1
Early online date9 Mar 2026
DOIs
Publication statusPublished - 9 Mar 2026

Data Availability Statement

All data are available in the main text or the supplementary materials. All raw data generated for this study have been
deposited to GSE GEO repository GSE314215. Homemade R script used in this study is publicly available on https://
github.com/Manu-1512/PSG9/; MIT License [76] and v1.0.0 amitpande74/PSG9-Isoform-Transmembrane-TopologyPrediction-using-ProtBERT: PSG9 ProtBERT Analysis v1.0; DOI: https://doi.org/10.5281/zenodo. 16,022,218; GNU General
Public License v3.0 only [108]. The public datasets analysed in this study are listed in Additional file 1. The uncropped
images are available in Additional file 2.

Acknowledgements

We thank all members from Izsvak lab for their support and suggestions in the project. The authors thank T. Andreas and
E. Kittmann (Blois’s Lab at UKE) for their excellent technical assistance in generating this work.

Funding

Open Access funding enabled and organized by Projekt DEAL. This work was supported by the following funding sources: Y.Q was supported by the China Scholarship Council (NO. 201504910684) and Guangdong Basic and Applied Basic Research Foundation (2025A1515012066). M.G. was supported by the Austrian Science Fund (FWF): https://doi. org/10.55776/I3304 and https://doi.org/10.55776/I6907. Additional funding was provided to S.M.B. by the Deutsche Forschungsgemeinschaft (DFG; BL1115/4-4 and BL1115/8-1), the Heisenberg Program (BL1115/3-1, BL1115/7-1, and BL1115/11-1), and the Heike Wolfgang Mühlbauer Stiftung. This work was supported by NIH grant 5R2IAI166122 to Dr. G. Dveksler.

Keywords

  • Pregnancy Specific Glycoprotein 9 (PSG9)
  • Syncytiotrophoblast differentiation
  • PolyA
  • Pre-eclampsia
  • Retroelement
  • Enhancer
  • Promoter
  • Evolution

ASJC Scopus subject areas

  • Ecology, Evolution, Behavior and Systematics
  • Genetics
  • Cell Biology

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