Boolean networks with reliable dynamics

Tiago P. Peixoto, Barbara Drossel

Research output: Contribution to journalArticlepeer-review

9 Citations (Scopus)

Abstract

We investigated the properties of Boolean networks that follow a given reliable trajectory in state space. A reliable trajectory is defined as a sequence of states, which is independent of the order in which the nodes are updated. We explored numerically the topology, the update functions, and the state space structure of these networks, which we constructed using a minimum number of links and the simplest update functions. We found that the clustering coefficient is larger than in random networks and that the probability distribution of three-node motifs is similar to that found in gene regulation networks. Among the update functions, only a subset of all possible functions occurs, and they can be classified according to their probability. More homogeneous functions occur more often, leading to a dominance of canalyzing functions. Finally, we studied the entire state space of the networks. We observed that with increasing systems size, fixed points become more dominant, moving the networks close to the frozen phase.
Original languageEnglish
Pages (from-to)056102
Number of pages1
JournalPhysical Review E
Volume80
Issue number5
DOIs
Publication statusPublished - 1 Nov 2009

Fingerprint Dive into the research topics of 'Boolean networks with reliable dynamics'. Together they form a unique fingerprint.

Cite this