Abstract
Understanding the process of fate specification, i.e. how multipotent stem cells are able to transition into one of several different cell types, is a central question in developmental biology. In our previous work we proposed a mathematical model for this transition which, perhaps surprisingly, appeared generically to include an oscillatory regime in the path from multipotent cells to fate-specified states.
Here we carry out a detailed mathematical analysis of two variants of a generic gene regulatory network. We show how symmetry organises many aspects of the model behaviour and reveal the role of a specific codimension-two bifurcation point as an organising centre. The central role of symmetry implies that qualitatively equivalent results would be obtained regardless of the modelling details. The model-independent nature of our results makes them of substantial wider interest and is supported by numerical work. We conclude that the overall sequence of bifurcations that create and destroy the oscillations is generically and robustly organised by this
codimension-two point. In the stem cell context the persistence of the oscillatory regime augments the perspective suggested by Waddington’s epigenetic landscape by highlighting the potentially dynamic nature of cell fate transitions.
Here we carry out a detailed mathematical analysis of two variants of a generic gene regulatory network. We show how symmetry organises many aspects of the model behaviour and reveal the role of a specific codimension-two bifurcation point as an organising centre. The central role of symmetry implies that qualitatively equivalent results would be obtained regardless of the modelling details. The model-independent nature of our results makes them of substantial wider interest and is supported by numerical work. We conclude that the overall sequence of bifurcations that create and destroy the oscillations is generically and robustly organised by this
codimension-two point. In the stem cell context the persistence of the oscillatory regime augments the perspective suggested by Waddington’s epigenetic landscape by highlighting the potentially dynamic nature of cell fate transitions.
| Original language | English |
|---|---|
| Article number | 20250935 |
| Number of pages | 29 |
| Journal | Proceedings of the Royal Society A: Mathematical Physical and Engineering Sciences |
| Volume | 482 |
| Issue number | 2336 |
| Early online date | 29 Apr 2026 |
| DOIs | |
| Publication status | Published - 30 Apr 2026 |
Bibliographical note
This work was supported by the Biotechnology and Biological Sciences Research Council, part of UKRI (grant nos. BB/S01604X/1 and BB/S015906/1).Data Availability Statement
Data and code available at: Dawes J. 2026 MATLAB code supporting the paper: A codimension-two bifurcation organises the dynamics of the transition between multipotent and fate-specified cell states. Zenodohttps://zenodo.org/records/18349911Acknowledgements
J.H.P.D. thanks Tony Roberts for comments on the centre manifold calculation and for independently verifying the results presented for this case.Funding
This work was supported by the Biotechnology and Biological Sciences Research Council, part of UKRI (grant nos. BB/S01604X/1 and BB/S015906/1).
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