Projects per year
Personal profile
Research interests
Research key words
Bacterial population genomics, evolutionary biology, molecular epidemiology, transmission, antibiotic resistance, one-health, wastewater microbiology, metagenomics, bioinformatics, human and animal bacterial pathogens, aquaculture.
My research career has focused on the evolution, population genomics and molecular epidemiology of a broad range of bacterial pathogens of humans and animals.
I have worked on the implementation of whole-genome sequencing (WGS) for molecular epidemiology and evolution of human pathogens, with a focus on Staphylococcus aureus and Klebsiella pneumoniae. I also have an interest in animal pathogens, and current project focus the “one health” perspective on antibiotic resistance. I was co-ordinator of a JPI-AMR consortium (SpARK) focused on the transmission of antibiotic resistant Klebsiella spp. in the environment in Northern Italy, was Co-I on the EPSRC (ReNEW) consortium working on environmental AMR in south Africa, and currently co-I on MRC (GCRF-AMR) consortium OH-DART focusing on AMR in Thailand.
I was awarded the Zoological Society of London Scientific Medal in 2010, and am an ISI highly cited researcher for 2015.
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
Fingerprint
- 1 Similar Profiles
Collaborations and top research areas from the last five years
-
The role of plasmid fusion in the evolution of pathogenic bacteria
Feil, E. (PI)
31/03/24 → 30/03/26
Project: Research council
-
Tools for the Epidemiology of AMR Plasmids, One-Health Transmission and Surveillance
Feil, E. (PI)
13/02/23 → 12/08/24
Project: Research council
-
UKRI GCRF/Newton Fund : Building an Early Warning System for community-wide infectious disease spread: SARS-CoV-2 tracking in Africa via environment fingerprinting- COVID-19
Kasprzyk-Hordern, B. (PI), Faraway, J. (CoI), Feil, E. (CoI), Smith, T. (CoI), Ehrhardt, B. (Researcher) & Gibbon, M. (Researcher)
Engineering and Physical Sciences Research Council
14/08/20 → 31/03/22
Project: Research council
-
EDGE
Kasprzyk-Hordern, B. (PI), Adams, B. (CoI), Barnett, J. (CoI), Di Lorenzo, M. (CoI), Estrela, P. (CoI), Faraway, J. (CoI), Feil, E. (CoI), Kjeldsen, T. (CoI), Metcalfe, B. (CoI), Smith, T. (CoI), Stanton Fraser, D. (CoI) & Wilson, P. (CoI)
Engineering and Physical Sciences Research Council
1/05/20 → 31/10/21
Project: Research council
-
One Health Drivers of Antibacterial Resistance in Thailand
Feil, E. (PI)
1/05/18 → 31/01/22
Project: Research council
-
Antimicrobial risk assessment–Aggregating aquatic chemical and resistome emissions
Bakos, V., Lóránt, B., Murray, A. K., Feil, E. J., Gaze, W. H. & Plósz, B. G., 1 Mar 2025, In: Water Research. 271, 122929.Research output: Contribution to journal › Review article › peer-review
Open Access -
Arctic cyanobacterial mat community diversity decreases with latitude across the Canadian Arctic
Hooper, P., Bass, D., Feil, E., Vincent, W. F., Lovejoy, C., Owen, C. J., Tsola, S. L. & Jungblut, A. D., 30 Jun 2024, In: FEMS Microbiology Ecology. 100, 6, fiae067.Research output: Contribution to journal › Article › peer-review
Open Access1 Citation (SciVal) -
Diversity, functional classification and genotyping of SHV β-lactamases in Klebsiella pneumoniae
Tsang, K. K., Lam, M. M. C., Wick, R. R., Wyres, K. L., Bachman, M., Baker, S., Barry, K., Brisse, S., Campino, S., Chiaverini, A., Cirillo, D. M., Clark, T., Corander, J., Corbella, M., Cornacchia, A., Cuénod, A., D'Alterio, N., Di Marco, F., Donado-Godoy, P. & Egli, A. & 55 others, , 21 Oct 2024, In: Microbial Genomics. 10, 10, 001294.Research output: Contribution to journal › Review article › peer-review
Open Access1 Citation (SciVal) -
Optimising machine learning prediction of minimum inhibitory concentrations in Klebsiella pneumoniae
Biffignandi, G. B., Chindelevitch, L., Corbella, M., Feil, E., Sassera, D. & Lees, J. A., 31 Mar 2024, In: Microbial Genomics. 10, 3, 001222.Research output: Contribution to journal › Article › peer-review
Open Access2 Citations (SciVal) -
Pan-pathogen deep sequencing of nosocomial bacterial pathogens in Italy in spring 2020: a prospective cohort study
Thorpe, H. A., Pesonen, M., Corbella, M., Pesonen, H., Gaiarsa, S., Boinett, C. J., Tonkin-Hill, G., Mäklin, T., Pöntinen, A. K., MacAlasdair, N., Gladstone, R. A., Arredondo-Alonso, S., Kallonen, T., Jamrozy, D., Lo, S. W., Chaguza, C., Blackwell, G. A., Honkela, A., Schürch, A. C. & Willems, R. J. L. & 8 others, , 1 Oct 2024, In: The Lancet Microbe. 5, 10, 100890.Research output: Contribution to journal › Article › peer-review
Open Access