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Research Output 2008 2019

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Article
2019

Lipid production through the single-step microwave hydrolysis of macroalgae using the oleaginous yeast Metschnikowia pulcherrima

Abeln, F., Fan, J., Budarin, V. L., Briers, H., Parsons, S., Allen, M. J., Henk, D. A., Clark, J. & Chuck, C. J., 1 Mar 2019, In : Algal Research. 38, p. 1-9 9 p., 101411.

Research output: Contribution to journalArticle

Snf2 controls pulcherriminic acid biosynthesis and antifungal activity of the biocontrol yeast Metschnikowia pulcherrima

Gore-Lloyd, D., Sumann, I., Brachmann, A., Schneeberger, K., Ortiz-Merino, R., Moreno, M., Schlafli, M., Kirner, P., Kron, A., Rueda-Mejia, M., Somerville, V., Wolfe, K., Piel, J., Ahrens, C., Henk, D. & Freimoser, F., 12 May 2019, In : Molecular Microbiology.

Research output: Contribution to journalArticle

Open Access
2018
7 Citations (Scopus)
Open Access
File
Metschnikowia
Phenylethyl Alcohol
Fragrances
Yeast
Fermentation
1 Citation (Scopus)

The additive free microwave hydrolysis of lignocellulosic biomass for fermentation to high value products

Fan, J., Santomauro, F., Budarin, V. L., Whiffin, F., Abeln, F., Chantasuban, T., Gore-Lloyd, D., Henk, D., Scott, R. J., Clark, J. & Chuck, C. J., 10 Oct 2018, In : Journal of Cleaner Production. 198, p. 776-784 9 p.

Research output: Contribution to journalArticle

Fermentation
fermentation
hydrolysis
Hydrolysis
Biomass
2016

Genetic structure within Septobasidium colonies suggests outcrossing and frequent non-self-fusion

Henk, D. A. & Vilgalys, R., 8 Sep 2016, In : Fungal Genomics and Biology. 6, 2, p. 143

Research output: Contribution to journalArticle

Open Access
Septobasidium
outcrossing
insects
genotyping
fungi
10 Citations (Scopus)
Open Access
Cryptococcus gattii
Metagenomics
Virulence
Fungi
Northwestern United States
2013
7 Citations (Scopus)

Species-specific PCR to describe local-scale distributions of four cryptic species in the Penicillium chrysogenum complex

Browne, A. GP., Fisher, M. C. & Henk, D. A., Oct 2013, In : Fungal Ecology. 6, 5, p. 419-429 11 p.

Research output: Contribution to journalArticle

Penicillium chrysogenum
Penicillium
fungus
fungi
rail transportation
28 Citations (Scopus)

Transmission of hypervirulence traits via sexual reproduction within and between lineages of the human fungal pathogen Cryptococcus gattii

Voelz, K., Ma, H., Phadke, S., Byrnes, E. J., Zhu, P., Mueller, O., Farrer, R. A., Henk, D. A., Lewit, Y., Hsueh, Y-P., Fisher, M. C., Idnurm, A., Heitman, J. & May, R. C., 5 Sep 2013, In : Plos Genetics. 9, 9, e1003771.

Research output: Contribution to journalArticle

Open Access
File
Cryptococcus gattii
sexual reproduction
virulence
Disease Outbreaks
Reproduction
21 Citations (Scopus)

Using false discovery rates to benchmark SNP-callers in next-generation sequencing projects

Farrer, R. A., Henk, D. A., MacLean, D., Studholme, D. J. & Fisher, M. C., 21 Mar 2013, In : Scientific Reports. 3, 1512.

Research output: Contribution to journalArticle

Open Access
File
Genes
2012
28 Citations (Scopus)

Clonality despite sex: the evolution of host-associated sexual neighborhoods in the pathogenic fungus penicillium marneffei

Henk, D. A., Shahar-Golan, R., Devi, K. R., Boyce, K. J., Zhan, N., Fedorova, N. D., Nierman, W. C., Hsueh, P. R., Yuen, K. Y., Sieu, T. P. M., Van Kinh, N., Wertheim, H., Baker, S. G., Day, J. N., Vanittanakom, N., Bignell, E. M., Andrianopoulos, A. & Fisher, M. C., 4 Oct 2012, In : PLoS Pathogens. 8, 10, e1002851.

Research output: Contribution to journalArticle

Penicillium
Fungi
Genetic Recombination
Population
Vietnam
1039 Citations (Scopus)

Emerging fungal threats to animal, plant and ecosystem health

Fisher, M. C., Henk, D. A., Briggs, C. J., Brownstein, J. S., Madoff, L. C., McCraw, S. L. & Gurr, S. J., 2012, In : Nature. 484, 7393, p. 186-194 9 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Sex, drugs and recombination: the wild life of Aspergillus: News and views: Perspective

Fisher, M. C. & Henk, D. A., 1 Mar 2012, In : Molecular Ecology. 21, 6, p. 1305-1306

Research output: Contribution to journalArticle

Aspergillus
aflatoxins
Genetic Recombination
recombination
wildlife
11 Citations (Scopus)

The gut fungus Basidiobolus ranarum has a large genome and different copy numbers of putatively functionally redundant elongation factor genes

Henk, D. A. & Fisher, M. C., 17 Feb 2012, In : PLoS ONE. 7, 2, 4 p., e31268.

Research output: Contribution to journalArticle

Entomophthorales
Basidiobolus
Peptide Elongation Factors
Genome Size
Fungi
2011
38 Citations (Scopus)

Common Reservoirs for Penicillium marneffei Infection in Humans and Rodents, China

Cao, C., Liang, L., Wang, W., Luo, H., Huang, S., Liu, D., Xu, J., Henk, D. A. & Fisher, M. C., 2011, In : Emerging Infectious Diseases. 17, 2, p. 209-214

Research output: Contribution to journalArticle

Penicillium
Rodentia
China
Infection
Genotype
6 Citations (Scopus)

Genetic diversity, recombination, and divergence in animal associated Penicillium dipodomyis

Henk, D. A. & Fisher, M. C., 5 Aug 2011, In : PLoS ONE. 6, 8, 6 p., e22883.

Research output: Contribution to journalArticle

Dipodomys
Penicillium
Genetic Recombination
Rats
Animals
47 Citations (Scopus)

Low Diversity Cryptococcus neoformans Variety grubii Multilocus Sequence Types from Thailand Are Consistent with an Ancestral African Origin

Simwami, S. P., Khayhan, K., Henk, D. A., Aanensen, D. M., Boekhout, T., Hagen, F., Brouwer, A. E., Harrison, T. S., Donnelly, C. A. & Fisher, M. C., 2011, In : PLoS Pathogens. 7, 4, e1001343.

Research output: Contribution to journalArticle

Cryptococcus neoformans
Thailand
Mortality
Genotype
HIV
254 Citations (Scopus)

Multiple emergences of genetically diverse amphibian-infecting chytrids include a globalized hypervirulent recombinant lineage

Farrer, R. A., Weinert, L. A., Bielby, J., Garner, T. W. J., Balloux, F., Clare, F., Bosch, J., Cunningham, A. A., Weldon, C., Du Preez, L. H., Anderson, L., Pond, S. L. K., Shahar-golan, R., Henk, D. A. & Fisher, M. C., 15 Nov 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 46, p. 18732-18736

Research output: Contribution to journalArticle

amphibians
biodiversity
allopatry
Central America
infection
7 Citations (Scopus)

Mycodiplosis (Diptera) infestation of rust fungi is frequent, wide spread and possibly host specific

Henk, D., Farr, D. F. & Aime, M. C., 1 Aug 2011, In : Fungal Ecology. 4, 4, p. 284-289

Research output: Contribution to journalArticle

rust disease
fungus
host specificity
fungi
larvae
20 Citations (Scopus)

Population Genetic Structure of Clinical and Environmental Isolates of Blastomyces dermatitidis, Based on 27 Polymorphic Microsatellite Markers

Meece, J. K., Anderson, J. L., Fisher, M. C., Henk, D. A., Sloss, B. L. & Reed, K. D., 1 Aug 2011, In : Applied and Environmental Microbiology. 77, 15, p. 5123-5131

Research output: Contribution to journalArticle

Blastomyces
Blastomyces dermatitidis
Genetic Structures
Population Genetics
Microsatellite Repeats
32 Citations (Scopus)

Speciation despite globally overlapping distributions in Penicillium chrysogenum: the population genetics of Alexander Fleming’s lucky fungus

Henk, D. A., Eagle, C. E., Brown, K., Van Den Berg, M. A., Dyer, P. S., Peterson, S. W. & Fisher, M. C., Oct 2011, In : Molecular Ecology. 20, 20, p. 4288-4301 14 p.

Research output: Contribution to journalArticle

Penicillium chrysogenum
Population Genetics
population genetics
Fungi
fungus
2010
120 Citations (Scopus)

Factors driving pathogenicity vs. prevalence of amphibian panzootic chytridiomycosis in Iberia

Walker, S. F., Bosch, J., Gomez, V., Garner, T. W. J., Cunningham, A. A., Schmeller, D. S., Ninyerola, M., Henk, D. A., Ginestet, C., Arthur, C. & Fisher, M. C., 1 Mar 2010, In : Ecology Letters. 13, 3, p. 372-382

Research output: Contribution to journalArticle

pathogenicity
Iberian Peninsula
amphibian
amphibians
pathogen