• MILNER CENTRE 1.27

Accepting PhD Students

20012022

Research output per year

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Research Output

Alternative splice in alternative lice

Tovar-Corona, J. M., Castillo-Morales, A., Chen, L., Olds, B. P., Clark, J. M., Reynolds, S. E., Pittendrigh, B. R., Feil, E. J. & Urrutia, A. O., 1 Oct 2015, In : Molecular Biology and Evolution. 32, 10, p. 2749-2759 11 p.

Research output: Contribution to journalArticle

Open Access
8 Citations (Scopus)

Alternative splicing: Α potential source of functional innovation in the eukaryotic genome

Chen, L., Tovar-Corona, J. M. & Urrutia, A. O., 2012, In : International Journal of Evolutionary Biology. 2012, 10 p., 596274.

Research output: Contribution to journalArticle

Open Access
File
96 Downloads (Pure)

Alternative splicing and the evolution of phenotypic novelty

Bush, S. J., Chen, L., Tovar-Corona, J. M. & Urrutia, A. O., 5 Feb 2017, In : Proceedings of the Royal Society B: Biological Sciences. 372, 1713, 20150474.

Research output: Contribution to journalReview article

23 Citations (Scopus)

A unification of mosaic structures in the human genome

Lercher, M. J., Urrutia, A. O., Pavlicek, A. & Hurst, L. D., 2003, In : Human Molecular Genetics. 12, 19, p. 2411-2415 5 p.

Research output: Contribution to journalArticle

97 Citations (Scopus)

Chromatin remodelling is a major source of coexpression of linked genes in yeast

Batada, N. N., Urrutia, A. O. & Hurst, L. D., 2007, In : Trends in Genetics. 23, 10, p. 480-484 5 p.

Research output: Contribution to journalArticle

64 Citations (Scopus)
110 Citations (Scopus)

Conditional expression explains molecular evolution of social genes in a microbe

de Oliveira, J. L., Morales, A. C., Stewart, B., Gruenheit, N., Engelmoer, J., Brown, S. B., de Brito, R. A., Hurst, L. D., Urrutia, A. O., Thompson, C. R. L. & Wolf, J. B., 23 Jul 2019, In : Nature Communications. 10, 1, p. 1-12 12 p., 3284.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Conserved transcriptomic profiles underpin monogamy across vertebrates

Young, R. L., Ferkin, M. H., Ockendon-Powell, N. F., Orr, V. N., Phelps, S. M., Pogány, Á., Richards-Zawacki, C. L., Summers, K., Székely, T., Trainor, B. C., Urrutia, A. O., Zachar, G., O’Connell, L. A. & Hofmann, H. A., 22 Jan 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 4, p. 1331-1336 6 p.

Research output: Contribution to journalArticle

18 Citations (Scopus)

Correcting for differential transcript coverage reveals a strong relationship between alternative splicing and organism complexity

Chen, L., Bush, S. J., Tovar-Corona, J. M., Castillo Morales, A. & Urrutia, A. O., 1 Jun 2014, In : Molecular Biology and Evolution. 31, 6, p. 1402-1413 12 p.

Research output: Contribution to journalArticle

Open Access
53 Citations (Scopus)
50 Downloads (Pure)

Do Alu repeats drive the evolution of the primate transcriptome?

Urrutia, A. O., Ocana, L. B. & Hurst, L. D., 1 Feb 2008, In : Genome Biology. 9, 2, 16 p., R25.

Research output: Contribution to journalArticle

File
17 Citations (Scopus)
92 Downloads (Pure)

Evidence for deep phylogenetic conservation of exonic splice-related constraints: Splice-related skews at exonic ends in the brown alga Ectocarpus are common and resemble those seen in humans

Wu, X., Tronholm, A., Fernandez Cáceres, E., Tovar-Corona, J. M., Chen, L., Urrutia, A. O. & Hurst, L. D., 2013, In : Genome biology and evolution. 5, 9, p. 1731-1745 15 p.

Research output: Contribution to journalArticle

Open Access
File
5 Citations (Scopus)
114 Downloads (Pure)

Evidence that the human X chromosome is enriched for male-specific but not female-specific genes

Lercher, M. J., Urrutia, A. O. & Hurst, L. D., 7 Jul 2003, In : Molecular Biology and Evolution. 20, 7, p. 1113-1116 4 p.

Research output: Contribution to journalArticle

77 Citations (Scopus)
55 Citations (Scopus)

Identifying Selection Signatures in Mammalian Genes Through the Analysis of Patterns of Gene Expression

Urrutia, A. & Hurst, L., 2005, SAGE: Current Technologies and Applications. Wang, SM. (ed.). Horizon Bioscience

Research output: Chapter in Book/Report/Conference proceedingChapter

Open Access
File
9 Citations (Scopus)
113 Downloads (Pure)

Increased levels of noisy splicing in cancers, but not for oncogene-derived transcripts

Chen, L., Tovar-Corona, J. M. & Urrutia, A. O., 15 Nov 2011, In : Human Molecular Genetics. 20, 22, p. 4422-4429 8 p.

Research output: Contribution to journalArticle

File
18 Citations (Scopus)
111 Downloads (Pure)
4 Citations (Scopus)

Modular reorganization of the global network of gene regulatory interactions during perinatal human brain development

Monzón Sandoval, J., Castillo Morales, A., Urrutia, A. & Gutierrez, H., 12 May 2016, In : BMC Developmental Biology. 16, 13.

Research output: Contribution to journalArticle

Open Access
File
1 Citation (Scopus)
117 Downloads (Pure)

Neocortex expansion is linked to size variations in gene families with chemotaxis, cell-cell signalling and immune response functions in mammals

Castillo-Morales, A., Monzón-Sandoval, J., de Sousa, A. A., Urrutia, A. O. & Gutierrez, H., 2016, In : Open Biology. 6, 10, 3489039.

Research output: Contribution to journalArticle

Open Access

Optimization of next-generation sequencing transcriptome annotation for species lacking sequenced genomes

Ockendon, N. F., O'Connell, L. A., Bush, S. J., Monzón Sandoval, J., Barnes, H., Szekely, T., Hofmann, H. A., Dorus, S. & Urrutia, A. O., Mar 2016, In : Molecular Ecology Resources. 16, 2, p. 446-458

Research output: Contribution to journalArticle

Open Access
12 Citations (Scopus)
1 Citation (Scopus)

Poblamiento temprano de America

Translated title of the contribution: Early peopling of the America continentUrrutia, A. & Urrutia Fucugauchi, J., 2011, Quaternario. National University of Mexico, UNAM

Research output: Chapter in Book/Report/Conference proceedingChapter

Postmitotic cell longevity–associated genes: a transcriptional signature of postmitotic maintenance in neural tissues

Castillo-Morales, A., Monzón-Sandoval, J., Urrutia, A. O. & Gutiérrez, H., 1 Feb 2019, In : Neurobiology of Aging. 74, p. 147-160 14 p.

Research output: Contribution to journalArticle

Open Access
File
17 Citations (Scopus)
121 Downloads (Pure)

Protein amino acid composition: a genomic signature of encephalization in mammals

Gutierrez, H., Castillo Morales, A., Monzon, J. & Urrutia, A. O., 23 Nov 2011, In : PLoS ONE. 6, 11, 5 p., e27261.

Research output: Contribution to journalArticle

File
4 Citations (Scopus)
104 Downloads (Pure)

Splicing and the evolution of proteins in mammals

Parmley, J. L., Urrutia, A. O., Potrzebowski, L., Kaessmann, H. & Hurst, L. D., 2007, In : PLoS Biology. 5, 2, e14.

Research output: Contribution to journalArticle

74 Citations (Scopus)

The signature of selection mediated by expression on human genes

Urrutia, A. O. & Hurst, L. D., 2003, In : Genome Research. 13, 10, p. 2260-2264 5 p.

Research output: Contribution to journalArticle

182 Citations (Scopus)

YAP is essential for tissue tension to ensure vertebrate 3D body shape

Porazinski, S., Wang, H., Asaoka, Y., Behrndt, M., Miyamoto, T., Morita, H., Hata, S., Sasaki, T., Krens, S. F. G., Osada, Y., Asaka, S., Momoi, A., Linton, S., Miesfeld, J. B., Link, B. A., Senga, T., Castillo-Morales, A., Urrutia, A. O., Shimizu, N., Nagase, H. & 6 others, Matsuura, S., Bagby, S., Kondoh, H., Nishina, H., Heisenberg, C. P. & Furutani-Seiki, M., 14 May 2015, In : Nature. 521, 7551, p. 217-221 5 p.

Research output: Contribution to journalArticle

Open Access
File
115 Citations (Scopus)
127 Downloads (Pure)