Research Output 1992 2019

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2019

Adapting for life in the extreme

Kobras, C. M. & Falush, D., 15 Jul 2019, In : eLife. 8, e48999.

Research output: Contribution to journalArticle

Open Access
5 Citations (Scopus)

Albugo candida race diversity, ploidy and host-associated microbes revealed using DNA sequence capture on diseased plants in the field

Jouet, A., Saunders, D. G. O., McMullan, M., Ward, B., Furzer, O., Jupe, F., Cevik, V., Hein, I., Thilliez, G. J. A., Holub, E., van Oosterhout, C. & Jones, J. D. G., 1 Feb 2019, In : New Phytologist. 221, 3, p. 1529-1543 15 p.

Research output: Contribution to journalArticle

Open Access
Albugo candida
Plant Diseases
Ploidies
ploidy
Candida
1 Citation (Scopus)

A new species of Coloborhynchus (Pterosauria, Ornithocheiridae) from the mid-Cretaceous of North Africa

Jacobs, M. L., Martill, D. M., Ibrahim, N. & Longrich, N., 1 Mar 2019, In : Cretaceous Research. 95, p. 77-88

Research output: Contribution to journalArticle

7 Citations (Scopus)
1 Downloads (Pure)

A specialized metabolic network selectively modulates Arabidopsis root microbiota

Huang, A. C., Jiang, T., Liu, Y. X., Bai, Y. C., Reed, J., Qu, B., Goossens, A., Nützmann, H. W., Bai, Y. & Osbourn, A., 10 May 2019, In : Science. 364, 6440, eaau6389.

Research output: Contribution to journalArticle

Open Access
File

A Species-Wide Inventory of NLR Genes and Alleles in Arabidopsis thaliana

Van de Weyer, A. L., Monteiro, F., Furzer, O. J., Nishimura, M. T., Cevik, V., Witek, K., Jones, J. D. G., Dangl, J. L., Weigel, D. & Bemm, F., 22 Aug 2019, In : Cell. 178, 5, p. 1260-1272.e14

Research output: Contribution to journalArticle

Open Access

Biogeography of the fish pathogen Aeromonas salmonicida inferred by vapA genotyping

Gulla, S., Bayliss, S., Björnsdóttir, B., Dalsgaard, I., Haenen, O., Jansson, E., McCarthy, U., Scholz, F., Vercauteren, M., Verner-Jeffreys, D., Welch, T., Wiklund, T. & Colquhoun, D. J., 12 Apr 2019, In : FEMS Microbiology Letters. 366, 7, p. 1-7 7 p., fnz074.

Research output: Contribution to journalArticle

Open Access

Conditional expression explains molecular evolution of social genes in a microbe

de Oliveira, J. L., Morales, A. C., Stewart, B., Gruenheit, N., Engelmoer, J., Brown, S. B., de Brito, R. A., Hurst, L. D., Urrutia, A. O., Thompson, C. R. L. & Wolf, J. B., 23 Jul 2019, In : Nature Communications. 10, 1, p. 1-12 12 p., 3284.

Research output: Contribution to journalArticle

Open Access
13 Citations (Scopus)

Conserved transcriptomic profiles underpin monogamy across vertebrates

Young, R. L., Ferkin, M. H., Ockendon-Powell, N. F., Orr, V. N., Phelps, S. M., Pogány, Á., Richards-Zawacki, C. L., Summers, K., Székely, T., Trainor, B. C., Urrutia, A. O., Zachar, G., O’Connell, L. A. & Hofmann, H. A., 22 Jan 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 4, p. 1331-1336 6 p.

Research output: Contribution to journalArticle

Controlled human infection with Bordetella pertussis induces asymptomatic, immunising colonisation

Preston, A., de Graaf, H., Ibrahim, M., Hill, A., Gbesemete, D., Vaughn, A., Gorringe, A., Buisman, A-M., Faust, S., Kester, K., Berbers, G., Diavotopoulos, D. & Read, R., 28 Sep 2019, In : Clinical Infectious Diseases. p. 1-35 35 p.

Research output: Contribution to journalArticle

Open Access

Core genome sequence analysis to characterize Salmonella enterica serovar Rissen ST469 from a swine production chain

Prasertsee, T., Chuammitri, P., Deeudom, M., Chokesajjawatee, N., Santiyanont, P., Tadee, P., Nuangmek, A., Tadee, P., Sheppard, S. K., Pascoe, B. & Patchanee, P., 2 Sep 2019, In : International Journal of Food Microbiology. 304, p. 68-74 7 p.

Research output: Contribution to journalArticle

Craniodental and postcranial characters of non-avian Dinosauria often imply different trees

Li, Y., Ruta, M. & Wills, M., 3 Sep 2019, (Accepted/In press) In : Systematic Biology.

Research output: Contribution to journalArticle

10 Citations (Scopus)

Diverse NLR immune receptors activate defence via the RPW8-NLR NRG1

Castel, B., Ngou, P-M., Cevik, V., Redkar, A., Kim, D-S., Yang, Y., Ding, P. & Jones, J. D. G., 1 Apr 2019, In : New Phytologist. 222, 2, p. 966-980 5 p.

Research output: Contribution to journalArticle

Open Access

Domestication of Campylobacter jejuni NCTC 11168

Pascoe, B., Williams, L. K., Calland, J. K., Meric, G., Hitchings, M. D., Dyer, M., Ryder, J., Shaw, S., Lopes, B. S., Chintoan-Uta, C., Allan, E., Vidal, A., Fearnley, C., Everest, P., Pachebat, J. A., Cogan, T. A., Stevens, M. P., Humphrey, T. J., Wilkinson, T. S., Cody, A. J. & 12 others, Colles, F. M., Jolley, K. A., Maiden, M. C. J., Strachan, N., Pearson, B. M., Linton, D., Wren, B. W., Parkhill, J., Kelly, D. J., van Vliet, A. H. M., Forbes, K. J. & Sheppard, S. K., 1 Jul 2019, In : Microbial Genomics. 5, 7, 000279.

Research output: Contribution to journalArticle

Open Access

Evolutionary Quantitative Genetics of Genomic Imprinting

O'Brien, E. K. & Wolf, J. B., 1 Jan 2019, In : Genetics. 211, 1, p. 75-88 14 p.

Research output: Contribution to journalArticle

Functional characterization of BcrR: a one-component transmembrane signal transduction system for bacitracin resistance

Darnell, R., Nakatani, Y., Knottenbelt, M., Gebhard, S. & Cook, G. M., 1 Apr 2019, In : Microbiology. 165, 4, p. 475-487 13 p.

Research output: Contribution to journalArticle

Gene pool transmission of multidrug resistance among Campylobacter from livestock, sewage and human disease

Mourkas, E., Florez-Cuadrado, D., Pascoe, B., Calland, J. K., Bayliss, S. C., Mageiros, L., Méric, G., Hitchings, M. D., Quesada, A., Porrero, C., Ugarte-Ruiz, M., Gutiérrez-Fernández, J., Domínguez, L. & Sheppard, S. K., 5 Aug 2019, In : Environmental Microbiology. p. 1-17 17 p.

Research output: Contribution to journalArticle

Open Access

Genomic Perspective on Multivariate Variation, Pleiotropy, and Evolution

Melo, D., Marroig, G. & Wolf, J. B., 1 Jun 2019, In : Journal of Heredity. 110, 4, p. 479-493 15 p., esz011.

Research output: Contribution to journalArticle

High tech research reveals preferential feeding in honey bees

Greco, M. K., Coates, B. & Feil, E. J., 2019, In : Journal of Apicultural Research. 58, 3, p. 471-477 7 p.

Research output: Contribution to journalArticle

In eubacteria, unlike eukaryotes, there is no evidence for selection favouring fail-safe 3' additional stop codons

Ho, A. T. & Hurst, L. D., 17 Sep 2019, In : Plos Genetics. 15, 9, p. 1-32 32 p., e1008386.

Research output: Contribution to journalArticle

Open Access

Lipid metabolism links nutrient-exercise timing to insulin sensitivity in men classified as overweight or obese. Breakfast, exercise and metabolic health

Edinburgh, R., Bradley, H., Abdullah, N-F., Robinson, S., Chrzanowski-Smith, O., Walhin, J-P., Joanisse, S., Manolopoulos, K., Philp, A., Hengist, A., Chabowski, A., Brodsky, F., Koumanov, F., Betts, J., Thompson, D., Wallis, G. & Gonzalez, J., 19 Oct 2019, In : Journal of Clinical Endocrinology & Metabolism. p. 1-47 47 p., dgz104.

Research output: Contribution to journalArticle

Open Access

Mate fidelity in a polygamous shorebird, the snowy plover (Charadrius nivosus)

Naerhulan, H., Valdebenito, J. O., Harding, P., Cruz-Lopez, M., Serrano-Meneses, M. A., James, R., Szekely, T. & Kupan, K., 1 Sep 2019, In : Ecology & Evolution. 9, 18, p. 10734-10745 12 p.

Research output: Contribution to journalArticle

Open Access
9 Downloads (Pure)

Parental care and the evolution of terrestriality in frogs

Vági, B., Végvári, Z., Liker, A., Freckleton, R. P. & Székely, T., 30 Apr 2019, In : Proceedings of the Royal Society B: Biological Sciences. 286, 1900, p. 1-10 10 p., 20182737.

Research output: Contribution to journalArticle

Open Access
File

Phage predation shapes the population structure of Shiga-toxigenic Escherichia coli O157:H7 in the UK: An evolutionary perspective

Cowley, L. A., Dallman, T. J., Jenkins, C. & Sheppard, S. K., 30 Aug 2019, In : Frontiers in Genetics. 10, JUL, p. 1-7 7 p., 763.

Research output: Contribution to journalArticle

Open Access

Phylogenetic incongruence and homoplasy in the appendages and bodies of arthropods: Why broad character sampling is best

Brinkworth, A., Wills, M. & Sansom, R., 1 Sep 2019, Zoological Journal of the Linnean Society, 187, 1, p. 100-116 17 p.

Research output: Contribution to specialist publicationArticle

Phylogeography of the Rufous vanga and the role of bioclimatic transition zones in promoting speciation within Madagascar

Younger, J., Dempster, P., Nyári, Á. S., Helms, T., Raherilalao, M. J., Goodman, S. M. & Reddy, S., 1 Oct 2019, In : Molecular Phylogenetics and Evolution. 139, p. 1-11 11 p., 106535.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Prevalence of faecal carriage of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli in veterinary hospital staff and students

Royden, A., Ormandy, E., Pinchbeck, G., Pascoe, B., Hitchings, M. D., Sheppard, S. K. & Williams, N. J., 1 Jan 2019, In : Veterinary Record Open. 6, 1, e000307.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Recent mixing of Vibrio parahaemolyticus populations

Yang, C., Pei, X., Wu, Y., Yan, L., Yan, Y., Song, Y., Coyle, N. M., Martinez-Urtaza, J., Quince, C., Hu, Q., Jiang, M., Feil, E., Yang, D., Song, Y., Zhou, D., Yang, R., Falush, D. & Cui, Y., 24 Jun 2019, In : ISME Journal. 13, 10, p. 2578-2588 11 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Snf2 controls pulcherriminic acid biosynthesis and antifungal activity of the biocontrol yeast Metschnikowia pulcherrima

Gore-Lloyd, D., Sumann, I., Brachmann, A., Schneeberger, K., Ortiz-Merino, R., Moreno, M., Schlafli, M., Kirner, P., Kron, A., Rueda-Mejia, M., Somerville, V., Wolfe, K., Piel, J., Ahrens, C., Henk, D. & Freimoser, F., 1 Jul 2019, In : Molecular Microbiology. 112, 1, p. 317-332 16 p.

Research output: Contribution to journalArticle

Open Access
3 Citations (Scopus)

The architecture of intra-organism mutation rate variation in plants

Hurst, L., 9 Apr 2019, In : PLoS Biology. 17, 4, p. e3000191 29 p., e3000191.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

The Energy Cost of Sitting versus Standing Naturally in Man

Betts, J., Smith, H., Johnson-Bonson, D., Ellis, T., Dagnall, J., Hengist, A., Carroll, H., Thompson, D., Gonzalez, J. & Afman, G., 1 Apr 2019, In : Medicine & Science in Sports & Exercise. 51, 4, p. 726-733 8 p.

Research output: Contribution to journalArticle

Open Access
File

The evolution of Bordetella pertussis has selected for mutations of acr that lead to sensitivity to hydrophobic molecules and fatty acids.

MacArthur, I., Belcher, T., King, J., Ramasamy, V., Alhammadi, M. & Preston, A., 10 Apr 2019, In : Emerging Microbes and Infections. 8, 1, p. 603-612 10 p.

Research output: Contribution to journalArticle

Open Access
10 Downloads (Pure)

The evolution of the tetrapod humerus: morphometrics, disparity, and evolutionary rates

Ruta, M., Krieger, J., Angielczyk, K. & Wills, M., 1 Mar 2019, In : Earth and Environmental Sciences Transactions of the Royal Society of Edinburgh. 109, 1-2, p. 351-369 19 p.

Research output: Contribution to journalArticle

Open Access
File
Open Access
249 Downloads (Pure)
Open Access
File
3 Downloads (Pure)

Total-evidence framework reveals complex morphological evolution in nightbirds (Strisores)

Chen, A., White, N. D., Benson, R. B. J., Braun, M. J. & Field, D. J., 1 Sep 2019, In : Diversity. 11, 9, 143.

Research output: Contribution to journalArticle

Open Access
File
5 Citations (Scopus)

Transgressive segregation reveals mechanisms of Arabidopsis immunity to Brassica-infecting races of white rust (Albugo candida)

Cevik, V., Boutrot, F., Apel, W., Robert-Seilaniantz, A., Furzer, O. J., Redkar, A., Castel, B., Kover, P. X., Prince, D. C., Holub, E. B. & Jones, J. D. G., 12 Feb 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 7, p. 2767-2773 7 p.

Research output: Contribution to journalArticle

Open Access

Using the wax moth larva Galleria mellonella infection model to detect emerging bacterial pathogens

Hernandez, R. J., Hesse, E., Dowling, A. J., Coyle, N. M., Feil, E. J., Gaze, W. H. & Vos, M., 4 Jan 2019, In : PeerJ. 6, 1, p. e6150 e6150.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

WGS of 1058 Enterococcus faecium from Copenhagen, Denmark, reveals rapid clonal expansion of vancomycin-resistant clone ST80 combined with widespread dissemination of a vanA-containing plasmid and acquisition of a heterogeneous accessory genome

Pinholt, M., Bayliss, S. C., Gumpert, H., Worning, P., Jensen, V. V. S., Pedersen, M., Feil, E. J. & Westh, H., 1 Jul 2019, In : Journal of Antimicrobial Chemotherapy. 74, 7, p. 1776-1785 10 p.

Research output: Contribution to journalArticle

Why humans (or something very similar) may have been destined to walk the Earth

Horton, J. & Taylor, T., 6 Jun 2019, The Conversation.

Research output: Contribution to specialist publicationArticle

Open Access
2018
1 Citation (Scopus)
3 Downloads (Pure)

Adipose tissue responses to breaking sitting in men and women with central adiposity

Chen, Y-C., Betts, J., Walhin, J-P. & Thompson, D., 1 Oct 2018, In : Medicine and Science in Sports and Exercise. 50, 10, p. 2049-2057 9 p.

Research output: Contribution to journalArticle

Open Access
File
2 Citations (Scopus)

A downy mildew effector evades recognition by polymorphism of expression and subcellular localization

Asai, S., Furzer, O. J., Cevik, V., Kim, D. S., Ishaque, N., Goritschnig, S., Staskawicz, B. J., Shirasu, K. & Jones, J. D. G., 5 Dec 2018, In : Nature Communications. 9, 1, p. 1-11 11 p., 5192.

Research output: Contribution to journalArticle

Open Access
5 Citations (Scopus)

A GWAS on Helicobacter pylori strains points to genetic variants associated with gastric cancer risk

Berthenet, E., Yahara, K., Thorell, K., Pascoe, B., Meric, G., Mikhail, J. M., Engstrand, L., Enroth, H., Burette, A., Megraud, F., Varon, C., Atherton, J. C., Smith, S., Wilkinson, T. S., Hitchings, M. D., Falush, D. & Sheppard, S. K., 2 Aug 2018, In : BMC Biology. 16, p. 1-11 11 p., 84.

Research output: Contribution to journalArticle

Open Access
stomach neoplasms
Helicobacter pylori
Genome-Wide Association Study
Stomach Neoplasms
cancer
5 Citations (Scopus)

A new edentulous pterosaur from the Cretaceous Kem Kem beds of south eastern Morocco

Martill, D. M., Unwin, D. M., Ibrahim, N. & Longrich, N., 1 Apr 2018, In : Cretaceous Research. 84, p. 1-12 12 p.

Research output: Contribution to journalArticle

pterosaur
new species
Cretaceous
new taxon
curvature
6 Citations (Scopus)

A North American stem turaco, and the complex biogeographic history of modern birds

Field, D. & Hsiang, A. Y., 25 Jun 2018, In : BMC Evolutionary Biology. 18, 1, p. 1-16 16 p., 102.

Research output: Contribution to journalArticle

Open Access
fossils
stem
tree crown
bird
fossil record
29 Citations (Scopus)

A tutorial on how not to over-interpret STRUCTURE and ADMIXTURE bar plots

Lawson, D. J., van Dorp, L. & Falush, D., 1 Dec 2018, In : Nature Communications. 9, 1, p. 1-11 3258.

Research output: Contribution to journalArticle

Open Access
plots
History
histories
Genetic Drift
Clustering algorithms
4 Citations (Scopus)

Bordetella pertussis isolates vary in their interactions with human complement components article

Brookes, C., Freire-Martin, I., Cavell, B., Alexander, F., Taylor, S., Persaud, R., Fry, N., Preston, A., Diavatopoulos, D. & Gorringe, A., 2018, In : Emerging Microbes and Infections. 7, 1, p. 1-14 15 p., 81.

Research output: Contribution to journalArticle

Open Access
Complement C1 Inhibitor Protein
Bordetella pertussis
Complement C3b
Complement Membrane Attack Complex
Whooping Cough