Research Output 1977 2020

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2014
12 Citations (Scopus)

A simple metric of promoter architecture robustly predicts expression breadth of human genes suggesting that most transcription factors are positive regulators

Hurst, L. D., Sachenkova, O., Daub, C., Forrest, A. R. R. & Huminiecki, L., 31 Jul 2014, In : Genome Biology. 15, 7, 413.

Research output: Contribution to journalArticle

Open Access
Transcription Factors
transcription factors
divergence
promoter regions
Activating Transcription Factors
5 Citations (Scopus)
87 Downloads (Pure)

A strong law of large numbers for branching processes: almost sure spine events

Harris, S. C. & Roberts, M. I., 8 May 2014, In : Electronic Communications in Probability. 19, p. 1-6 6 p., 28.

Research output: Contribution to journalArticle

Open Access
File
Strong law of large numbers
Spine
Branching process
Almost Sure Convergence
Manipulation
7 Citations (Scopus)
103 Downloads (Pure)

Asymptotical computations for a model of flow in saturated porous media

Amodio, P., Budd, C. J., Koch, O., Settanni, G. & Weinmüller, E., 15 Jun 2014, In : Applied Mathematics and Computation. 237, p. 155-167 13 p.

Research output: Contribution to journalArticle

Open Access
File
Porous Media
Porous materials
Initial value problems
Second-order Ordinary Differential Equations
Finite difference method
7 Citations (Scopus)
108 Downloads (Pure)

Bacillus subtilis as a Platform for Molecular Characterisation of Regulatory Mechanisms of Enterococcus faecalis Resistance against Cell Wall Antibiotics

Fang, C., Stiegeler, E., Cook, G. M., Mascher, T. & Gebhard, S., 27 Mar 2014, In : PLoS ONE. 9, 3, p. e93169

Research output: Contribution to journalArticle

Open Access
File
6 Citations (Scopus)
73 Downloads (Pure)

Bounds on the dynamics of sink populations with noisy immigration

Eager, E. A., Guiver, C., Hodgson, D., Rebarber, R., Stott, I. & Townley, S., Mar 2014, In : Theoretical Population Biology. 92, p. 88-96 9 p.

Research output: Contribution to journalArticle

Open Access
File
immigration
Penstemon
Oncorhynchus tshawytscha
blowout
extinction
8 Citations (Scopus)
95 Downloads (Pure)

Branching Brownian Motion with Catalytic Branching at the Origin

Bocharov, S. & Harris, S. C., Dec 2014, In : Acta Applicandae Mathematicae. 134, 1, p. 201-228 28 p.

Research output: Contribution to journalArticle

Open Access
File
Branching Brownian Motion
Brownian movement
Branching
Strong law of large numbers
Local Time

Branching random walk in an inhomogeneous breeding potential

Bocharov, S. & Harris, S. C., 30 Oct 2014, In : Séminaire de Probabilités. XLVI, p. 1-32 32 p.

Research output: Contribution to journalArticle

Branching Random Walk
Continuous Time Random Walk
Asymptotic Behavior
5 Citations (Scopus)

Breeding distribution and conservation of the Crab Plover (Dromas ardeola) in Saudi Arabia (Aves: Charadriiformes)

Almalki, M., Alrashidi, M., Shobrak, M. & Székely, T., Feb 2014, In : Zoology in the Middle East. 60, 1, p. 6-12 6 p.

Research output: Contribution to journalArticle

Ardeola
Charadriiformes
Saudi Arabia
Aves
crabs
5 Citations (Scopus)
94 Downloads (Pure)

Computation of three-dimensional flexural-gravity solitary waves in arbitrary depth

Wang, Z., Milewski, P. A. & Vanden-Broeck, J-M., 2014, In : Procedia IUTAM. 11, p. 119-129 11 p.

Research output: Contribution to journalArticle

File
deep water
shallow water
elastic sheets
solitary waves
gravitation
6 Citations (Scopus)
104 Downloads (Pure)

Correcting CDOM fluorescence measurements for temperature effects under field conditions in freshwaters

Watras, C. J., Morrison, K. A., Mather, J., Milewski, P. & Hanson, P. C., Jan 2014, In : Limnology and Oceanography: Methods. 12, 1, p. 23-24 2 p.

Research output: Contribution to journalArticle

Open Access
File
Thermal effects
Quenching
Fluorescence
Temperature
7 Citations (Scopus)
112 Downloads (Pure)

Crystal Structure of PhnF, a GntR-Family Transcriptional Regulator of Phosphate Transport in Mycobacterium smegmatis

Gebhard, S., Busby, J. N., Fritz, G., Moreland, N. J., Cook, G. M., Lott, J. S., Baker, E. N. & Money, V. A., 1 Oct 2014, In : Journal of Bacteriology. 196, 19, p. 3472-3481

Research output: Contribution to journalArticle

Open Access
File
5 Citations (Scopus)
91 Downloads (Pure)

Current noise-removal methods can create false signals in ecogenomic data

Rossberg, A. G., Rogers, T. & McKane, A. J., May 2014, In : Proceedings of the Royal Society B: Biological Sciences. 281, 1783, p. 1 - 3 3 p., 20140191.

Research output: Contribution to journalArticle

Open Access
File
20 Citations (Scopus)
69 Downloads (Pure)

Defence against antimicrobial peptides: Different strategies in Firmicutes

Revilla-Guarinos, A., Gebhard, S., Mascher, T. & Zúñiga, M., 1 May 2014, In : Environmental Microbiology. 16, 5, p. 1225-1237 13 p.

Research output: Contribution to journalArticle

Open Access
File
Firmicutes
antimicrobial peptides
defense mechanisms
peptide
defense mechanism
5 Citations (Scopus)

Delayed juvenile dispersal and monogamy, but no cooperative breeding in white-breasted mesites (Mesitornis variegata)

Gamero, A., Székely, T. & Kappeler, P. M., Jan 2014, In : Behavioral Ecology and Sociobiology. 68, 1, p. 73-83 11 p.

Research output: Contribution to journalArticle

cooperative breeding
monogamy
birds
parental care
bird
32 Citations (Scopus)
50 Downloads (Pure)

Developmental Programming Mediated by Complementary Roles of Imprinted Grb10 in Mother and Pup

Cowley, M., Garfield, A. S., Madon-Simon, M., Charalambous, M., Clarkson, R. W., Smalley, M. J., Kendrick, H., Isles, A. R., Parry, A. J., Carney, S., Oakey, R. J., Heisler, L. K., Moorwood, K., Wolf, J. B. & Ward, A., 28 Feb 2014, In : PLoS Biology. 12, 2, p. 1-13 13 p., e1001799.

Research output: Contribution to journalArticle

Open Access
pups
health status
Health Status
Growth
Fats
24 Citations (Scopus)

Disease-induced modification of prey competition in eco-epidemiological models

Sieber, M., Malchow, H. & Hilker, F. M., Jun 2014, In : Ecological Complexity. 18, p. 74-82

Research output: Contribution to journalArticle

pathogen
predator
predators
pathogens
intraspecific competition
12 Citations (Scopus)

Disease in group-defending prey can benefit predators

Bate, A. M. & Hilker, F. M., 1 Feb 2014, In : Theoretical Ecology. 7, 1, p. 87-100 14 p.

Research output: Contribution to journalArticle

predator
infectious disease
functional response
defence
45 Citations (Scopus)
66 Downloads (Pure)

Divorce and infidelity are associated with skewed adult sex ratios in birds

Liker, A., Freckleton, R. P. & Székely, T., Apr 2014, In : Current Biology. 24, 8, p. 880-884

Research output: Contribution to journalArticle

Open Access
File
divorce
Divorce
Pair Bond
Sex Ratio
Birds
4 Citations (Scopus)

Do you have to be albino to be albino?

Montoliu, L. & Kelsh, R., May 2014, In : Pigment Cell & Melanoma Research. 27, 3, p. 325-326 2 p.

Research output: Contribution to journalArticle

26 Citations (Scopus)

Dynamic social networks in guppies (Poecilia reticulata)

Wilson, A. D. M., Krause, S., James, R., Croft, D. P., Ramnarine, I. W., Borner, K. K., Clement, R. J. G. & Krause, J., Jun 2014, In : Behavioral Ecology and Sociobiology. 68, 6, p. 915-925 11 p.

Research output: Contribution to journalArticle

social networks
Poecilia reticulata
social network
animal
vertebrate
35 Citations (Scopus)

Efficient inference of recombination hot regions in bacterial genomes

Yahara, K., Didelot, X., Ansari, M. A., Sheppard, S. K. & Falush, D., 1 Jun 2014, In : Molecular Biology and Evolution. 31, 6, p. 1593-1605 13 p.

Research output: Contribution to journalArticle

Open Access
71 Citations (Scopus)

Environmentally responsive genome-wide accumulation of de novo Arabidopsis thaliana mutations and epimutations

Jiang, C., Mithani, A., Belfield, E. J., Mott, R., Hurst, L. D. & Harberd, N. P., 1 Nov 2014, In : Genome Research. 24, 11, p. 1821-1829 9 p.

Research output: Contribution to journalArticle

Open Access
Cytosine
Arabidopsis
Genome
Mutation
INDEL Mutation
6 Citations (Scopus)

Errors in science: The role of reviewers

Székely, T., Krüger, O. & Krause, E. T., Jul 2014, In : Trends in Ecology & Evolution. 29, 7, p. 371-373 3 p.

Research output: Contribution to journalArticle

peers
quality control
control system
decision making
science
24 Citations (Scopus)

Evolutionary rates for multivariate traits: The role of selection and genetic variation

Pitchers, W., Wolf, J. B., Tregenza, T., Hunt, J. & Dworkin, I., 7 Jul 2014, In : Philosophical Transactions of the Royal Society B: Biological Sciences. 369, 1649, p. 1 - 13 13 p., 20130252.

Research output: Contribution to journalArticle

genetic variation
body conformation
genetic variance
life history
Biological Sciences
23 Citations (Scopus)
101 Downloads (Pure)

Exome sequencing identifies frequent mutation of MLL2 in non-small cell lung carcinoma from Chinese patients

Yin, S., Yang, J., Lin, B., Deng, W., Zhang, Y., Yi, X., Shi, Y., Tao, Y., Cai, J., Wu, C-I., Zhao, G., Hurst, L. D., Zhang, J., Hu, L. & Kong, X., 12 Aug 2014, In : Scientific Reports. 4, 6036.

Research output: Contribution to journalArticle

Open Access
File
Exome
Non-Small Cell Lung Carcinoma
Mutation
Histone-Lysine N-Methyltransferase
Genes
16 Citations (Scopus)
106 Downloads (Pure)

Experimental assessment of mating opportunities in three shorebird species

Parra, J. E., Beltrán, M., Zefania, S., Dos Remedios, N. & Székely, T., Apr 2014, In : Animal Behaviour. 90, p. 83-90 8 p.

Research output: Contribution to journalArticle

Open Access
File
wader
Charadrius alexandrinus
courtship
pair bond
Charadrius
14 Citations (Scopus)

Fast three dimensional r-adaptive mesh redistribution

Browne, P. A., Budd, C. J., Piccolo, C. & Cullen, M., 15 Oct 2014, In : Journal of Computational Physics. 275, p. 174-196 23 p.

Research output: Contribution to journalArticle

Weather forecasting
mesh
weather forecasting
tangling
grids
4 Citations (Scopus)
96 Downloads (Pure)

Galton-Watson trees with vanishing martingale limit

Berestycki, N., Gantert, N., Morters, P. & Sidorova, N., May 2014, In : Journal of Statistical Physics. 155, 4, p. 737-762

Research output: Contribution to journalArticle

Open Access
File
martingales
Galton-Watson Tree
Martingale
Entropic Repulsion
Tail Behavior
6 Citations (Scopus)

Gene interactions in the evolution of genomic imprinting

Wolf, J. B. & Brandvain, Y., Aug 2014, In : Heredity. 113, p. 129-137 9 p.

Research output: Contribution to journalArticle

Genomic Imprinting
Alleles
Genes
Genotype
Sex Chromosomes
34 Citations (Scopus)

Genome-wide mapping in a house mouse hybrid zone reveals hybrid sterility loci and Dobzhansky-Muller interactions

Turner, L. M. & Harr, B., 9 Dec 2014, In : eLife. 3, p. 1-1 1 p., e02504.

Research output: Contribution to journalArticle

Open Access
Chromosome Mapping
Infertility
Genes
Gene expression
Testis
1 Citation (Scopus)

Genomic imprinting: Theories and data

Spencer, H. G. & Wolf, J. B., 1 Aug 2014, In : Heredity. 113, 2, p. 93-95 3 p.

Research output: Contribution to journalArticle

30 Citations (Scopus)

Genomic networks of hybrid sterility

Turner, L. M., White, M. A., Tautz, D. & Payseur, B. A., 20 Feb 2014, In : Plos Genetics. 10, 2, e1004162.

Research output: Contribution to journalArticle

Open Access
sterility
Infertility
genomics
Mus musculus
loci
9 Citations (Scopus)
90 Downloads (Pure)

Global stability of an age-structured population model

Franco, D., Logemann, H. & Perán, J., 1 Mar 2014, In : Systems & Control Letters. 65, 1, p. 30-36 7 p.

Research output: Contribution to journalArticle

Open Access
File
Control theory
Feedback
7 Citations (Scopus)
99 Downloads (Pure)

Growth-induced breaking and unbreaking of ergodicity in fully-connected spin systems

Morris, R. G. & Rogers, T., 12 Aug 2014, In : Journal of Physics A: Mathematical and Theoretical. 47, 34, 342003.

Research output: Contribution to journalArticle

File
Spin Systems
Ergodicity
Canonical Model
Ising model
Statistical mechanics
25 Citations (Scopus)

Harvest timing and its population dynamic consequences in a discrete single-species model

Cid, B., Hilker, F. M. & Liz, E., Feb 2014, In : Mathematical Biosciences. 248, p. 78-87

Research output: Contribution to journalArticle

Population dynamics
Population Dynamics
Timing
Harvesting
population dynamics
23 Citations (Scopus)
99 Downloads (Pure)

Hormesis results in trade-offs with immunity

McClure, C. D., Zhong, W., Hunt, V. L., Chapman, F. M., Hill, F. V. & Priest, N. K., Aug 2014, In : Evolution. 68, 8, p. 2225-2233

Research output: Contribution to journalArticle

Open Access
File
Hormesis
immunity
Immunity
pathogen
inbreeding
5 Citations (Scopus)

Human disturbance and conspecifics influence display site selection by Great Bustards Otis tarda

Burnside, R. J., Végvári, Z. S., James, R., Konyhás, S., Kovács, G. & Szekely, T., Mar 2014, In : Bird Conservation International. 24, 1, p. 32-44 13 p.

Research output: Contribution to journalArticle

site selection
habitat quality
disturbance
habitat preferences
habitats
25 Citations (Scopus)
97 Downloads (Pure)

Identification and Characterization of a Bacitracin Resistance Network in Enterococcus faecalis

Gebhard, S., Fang, C., Shaaly, A., Leslie, D. J., Weimar, M. R., Kalamorz, F., Carne, A. & Cook, G. M., 1 Mar 2014, In : Antimicrobial Agents and Chemotherapy. 58, 3, p. 1425-1433

Research output: Contribution to journalArticle

Open Access
File
1 Citation (Scopus)
237 Downloads (Pure)

Identification of cis-regulatory elements in the upstream regions of zebrafish runx3 gene through an in silico analysis: Implications for function.

Simoes, B., Conceição, N., Kelsh, R. & Cancela, M. L., Aug 2014, In : Journal of Applied Ichthyology. 30, 4, p. 661-670 10 p.

Research output: Contribution to journalArticle

Open Access
File
regulatory sequences
Danio rerio
transcription factors
promoter regions
gene
7 Citations (Scopus)

Immunoreactivity distribution of vasotocin and vasoactive intestinal peptide in brain nuclei of two songbird species with different breeding systems

Montagnese, C. M., Székely, T., Gray, D., Balázsa, T. & Zachar, G., 2014, In : Brain, Behavior and Evolution. 83, 2, p. 140-149 10 p.

Research output: Contribution to journalArticle

Vasotocin
Songbirds
Vasoactive Intestinal Peptide
Breeding
Brain
31 Citations (Scopus)

Imprinted gene expression in hybrids: perturbed mechanisms and evolutionary implications

Wolf, J. B., Oakey, R. J. & Feil, R., Aug 2014, In : Heredity. 113, p. 167-175 9 p.

Research output: Contribution to journalArticle

Gene Expression
Mammals
Genes
Genomic Imprinting
Phenotype
5 Citations (Scopus)
128 Downloads (Pure)

Introduction to the special issue on machine morality: The machine as moral agent and patient

Gunkel, D. J. & Bryson, J., 1 Mar 2014, In : Philosophy & Technology. 27, 1, p. 5-8 4 p.

Research output: Contribution to journalArticle

Open Access
File
Morality
Moral Agents
Birmingham
Symposium
Moral philosophy
5 Citations (Scopus)

Mate preference does not influence reproductive motivation and parental cooperation in female zebra finches

Pogány, Á., Szurovecz, Z., Vincze, E., Barta, Z. & Székely, T., 2014, In : Behaviour. 151, 12-13, p. 1885-1901 17 p.

Research output: Contribution to journalArticle

Finches
Taeniopygia guttata
Equidae
mating behavior
Motivation
11 Citations (Scopus)
102 Downloads (Pure)

Model reduction by balanced truncation for systems with nuclear Hankel operators

Guiver, C. & Opmeer, M. R., 31 Dec 2014, In : SIAM Journal on Control and Optimization. 52, 2, p. 1366-1401 36 p.

Research output: Contribution to journalArticle

Open Access
File
Nuclear Operators
Balanced Truncation
Sobolev spaces
Hankel Operator
Model Reduction
7 Citations (Scopus)
101 Downloads (Pure)
Open Access
File
Rotating Machinery
Rotating machinery
machinery
Rotor
rotors
16 Citations (Scopus)
91 Downloads (Pure)

Numerical study of interfacial solitary waves propagating under an elastic sheet

Wang, Z., Pãrãu, E. I., Milewski, P. A. & Vanden-Broeck, J-M., 8 Aug 2014, In : Proceedings of the Royal Society A. 470, 2168, 20140111.

Research output: Contribution to journalArticle

Open Access
File
elastic sheets
solitary waves
wave packets
baroclinic waves
boundary integral method
93 Citations (Scopus)

Oct4 is required for lineage priming in the developing inner cell mass of the mouse blastocyst

Le Bin, G. C., Muñoz-Descalzo, S., Kurowski, A., Leitch, H., Lou, X., Mansfield, W., Etienne-Dumeau, C., Grabole, N., Mulas, C., Niwa, H., Hadjantonakis, A. & Nichols, J., 1 Mar 2014, In : Development. 141, 5, p. 1001-1010 10 p.

Research output: Contribution to journalArticle

Open Access
Blastocyst Inner Cell Mass
Endoderm
Embryonic Structures
Germ Layers
Blastocyst
11 Citations (Scopus)
105 Downloads (Pure)

On the maintenance of bird song dialects

Planqué, R., Britton, N. F. & Slabbekoorn, H., Jan 2014, In : Journal of Mathematical Biology. 68, 1-2, p. 505-531 27 p.

Research output: Contribution to journalArticle

Open Access
File
Birds
Music
animal communication
Patch
Maintenance
2 Citations (Scopus)
105 Downloads (Pure)

Partial cross-enhancement in models for dengue epidemiology

Woodall, H. & Adams, B., 21 Jun 2014, In : Journal of Theoretical Biology. 351, p. 67-73 7 p.

Research output: Contribution to journalArticle

Open Access
File
Epidemiology
dengue
Dengue
Coinfection
Viruses
213 Downloads (Pure)

Peptidantibiotika — Frühwarnsysteme und Katastrophenschutz bei Bakterien

Translated title of the contribution: Peptide antibiotics - early warning systems and disaster management in bacteriaGebhard, S. & Dintner, S., 14 May 2014, In : BIOspektrum. 20, 3, p. 263-266 4 p.

Research output: Contribution to journalArticle

Open Access
File
Disasters
Anti-Bacterial Agents
Bacteria
Peptides
Poisons