Centre for Mathematical Biology &ndash; Research Output

Crick, T., Brain, M., De Vos, M. & Fitch, J., 2009, Logic Programming and Nonmonotonic Reasoning. Erdem, E., Fangzhen, L. & Schaub, T. (eds.). Berlin, Germany: Springer, Vol. 5753. p. 554-559 6 p. (Lecture Notes in Computer Science).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Genetics and evolutionary consequences of maternal effects

Cheverud, J. M. & Wolf, J. B., Jun 2009, Maternal Effects in Mammals. Maestripieri, D. & Mateo, J. M. (eds.). Chicago University Press, p. 11-37 27 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

138 Citations (Scopus)

How is sexual conflict over parental care resolved? A meta-analysis

Harrison, F., Barta, Z., Cuthill, I. & Szekely, T., 2009, In : Journal of Evolutionary Biology. 22, 9, p. 1800-1812 13 p.

Research output: Contribution to journal › Article

sexual conflict

parental care

meta-analysis

birds

energy

1 Citation (Scopus)

Image-model coupling: a simple information theoretic perspective for image sequences

Smith, N. D., Mitchell, C. N. & Budd, C. J., 20 Mar 2009, In : Nonlinear Processes in Geophysics. 16, 2, p. 197-210 14 p.

Research output: Contribution to journal › Article

Open Access

Geophysics

Image matching

Image recognition

Ionosphere

output

25 Citations (Scopus)

Input-to-state stability of differential inclusions with applications to hysteretic and quantized feedback systems

Jayawardhana, B., Logemann, H. & Ryan, E. P., 2009, In : SIAM Journal on Control and Optimization. 48, 2, p. 1031-1054 24 p.

Research output: Contribution to journal › Article

Feedback Systems

Differential Inclusions

Feedback

Interconnection

Hysteresis Operators

30 Citations (Scopus)

In vivo transungual iontophoresis: effect of DC current application on ionic transport and on transonychial water loss

Dutet, J. & Delgado-Charro, M. B., 3 Dec 2009, In : Journal of Controlled Release. 140, 2, p. 117-125 9 p.

Research output: Contribution to journal › Article

Iontophoresis

Water

Nails

Skin

Sodium Chloride

46 Citations (Scopus)

Kentish versus Snowy Plover: Phenotypic and genetic analyses of Charadrius alexandrinus reveal divergence of Eurasian and American subspecies

Kupper, C., Augustin, J., Kosztolanyi, A., Burke, T., Figuerola, J. & Szekely, T., 2009, In : Auk. 126, 4, p. 839-852 14 p.

Research output: Contribution to journal › Article

Charadrius alexandrinus

subspecies

divergence

wader

Charadriidae

8 Citations (Scopus)

76 Downloads (Pure)

Learning and herding using case-based decisions with local interactions

Krause, A., May 2009, In : IEEE Transactions on Systems Man and Cybernetics - Part A: Systems and Humans. 39, 3, p. 662-669

Research output: Contribution to journal › Article

File

Decision theory

40 Citations (Scopus)

86 Downloads (Pure)

Ligand-independent traffic of notch buffers activated armadillo in Drosophila

Sanders, P. G. T., Muñoz-Descalzo, S., Balayo, T., Wirtz-Peitz, F., Hayward, P. & Martinez Arias, A., 11 Aug 2009, In : PLoS Biology. 7, 8, 18 p., e1000169.

Research output: Contribution to journal › Article

Open Access

File

Armadillos

Notch Receptors

Dasypodidae

traffic

Drosophila

5 Citations (Scopus)

Measure changes with extinction

Harris, S. C. & Roberts, M. I., 15 Apr 2009, In : Statistics & Probability Letters. 79, 8, p. 1129-1133 5 p.

Research output: Contribution to journal › Article

Melanocytes, modeling and maths - do we really understand differentiation?

Greenhill, E., Rocco, A., Nikaido, M. & Kelsh, R. N., 2009, In : Pigment Cell & Melanoma Research. 22, 5, p. 21

Research output: Contribution to journal › Article

Method for non-invasively determining the relative levels of two biological substances. B2

Delgado-Charro, M. & Guy, R., 30 Jun 2009, Patent No. US7555337, Priority date 17 Jun 2001, Priority No. EP01114750

Research output: Patent

Method for non-invasively determining the relative levels of two substances present in a biological system. C

Delgado-Charro, M. & Guy, R., 18 Aug 2009, IPC No. A61B5/00; A61N1/30, Patent No. CA2450965, Priority date 22 Jun 2001, Priority No. EP01114750

Research output: Patent

54 Citations (Scopus)

86 Downloads (Pure)

Modeling spatiotemporal forest health monitoring data

Augustin, N. H., Musio, M., von Wilpert, K., Kublin, E., Wood, S. N. & Schumacher, M., Sep 2009, In : Journal of the American Statistical Association. 104, 487, p. 899-911 13 p.

Research output: Contribution to journal › Article

Open Access

File

Spatio-temporal Modeling

Health Monitoring

Defoliation

Space-time

Pollution

6 Citations (Scopus)

Modelling normative frameworks using answer set programing

Cliffe, O., De Vos, M. & Padget, J., 2009, Logic Programming and Nonmonotonic Reasoning. Erdem, E., Fangzhen, L. & Schaub, T. (eds.). Berlin, Germany: Springer, Vol. 5753. p. 548-553 6 p. (Lecture Notes in Computer Science).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Semantics

Formal verification

23 Citations (Scopus)

Modulated and localized states in a finite domain

Dawes, J. H. P., 2009, In : SIAM Journal on Applied Dynamical Systems. 8, 3, p. 909-930 22 p.

Research output: Contribution to journal › Article

16 Citations (Scopus)

Monoallelic expression and tissue specificity are associated with high crossover rates

Necsulea, A., Semon, M., Duret, L. & Hurst, L. D., Dec 2009, In : Trends in Genetics. 25, 12, p. 519-522 4 p.

Research output: Contribution to journal › Article

Organ Specificity

Genetic Recombination

Genes

Human Genome

40 Citations (Scopus)

Moving mesh generation using the parabolic Monge–Ampère equation

Budd, C. J. & Williams, J. F., 2009, In : SIAM Journal on Scientific Computing. 31, 5, p. 3438-3465 28 p.

Research output: Contribution to journal › Article

Moving Mesh

Monge-Ampère Equation

Mesh generation

Mesh Generation

Partial differential equations

Multiple Intersection Exponents for Planar Brownian Motion

Klenke, A. & Morters, P., 2009, In : Journal of Statistical Physics. 136, 2, p. 373-397 25 p.

Research output: Contribution to journal › Article

27 Citations (Scopus)

151 Downloads (Pure)

Negotiation between parents over care: reversible compensation during incubation

Kosztolanyi, A., Cuthill, I. C. & Szekely, T., 2009, In : Behavioral Ecology. 20, 2, p. 446-452 7 p.

Research output: Contribution to journal › Article

File

Charadrius alexandrinus

nest

incubation

parental role

nests

116 Citations (Scopus)

Network structure and parasite transmission in a group living lizard, the gidgee skink, Egernia stokesii

Godfrey, S. S., Bull, C. M., James, R. & Murray, K., May 2009, In : Behavioral Ecology and Sociobiology. 63, 7, p. 1045-1056 12 p.

Research output: Contribution to journal › Article

parasite transmission

Scincidae

lizard

lizards

tick

35 Citations (Scopus)

91 Downloads (Pure)

Noisy splicing, more than expression regulation, explains why some exons are subject to nonsense-mediated mRNA decay

Zhang, Z. G., Xin, D. D., Wang, P., Zhou, L., Hu, L. D., Kong, X. Y. & Hurst, L. D., 14 May 2009, In : BMC Biology. 7, 23

Research output: Contribution to journal › Article

File

Nonsense Mediated mRNA Decay

exons

Exons

Nonsense Codon

deterioration

5 Citations (Scopus)

Old nests are cues for suitable breeding sites in the Eurasian penduline tit Remiz pendulinus

Gergely, Z., Meszaros, L. A., Szabad, J. & Szekely, T., 2009, In : Journal of Avian Biology. 40, 1, p. 2-6 5 p.

Research output: Contribution to journal › Article

breeding site

breeding sites

nest

nests

nest site

76 Citations (Scopus)

Physiology of mycobacteria

Cook, G. M., Berney, M., Gebhard, S., Heinemann, M., Cox, R. A., Danilchanka, O. & Niederweiss, M., 2009, Advances in Microbial Physiology. Elsevier, Vol. 55. p. 81-182

Research output: Chapter in Book/Report/Conference proceeding › Chapter

99 Citations (Scopus)

Potential banana skins in animal social network analysis

James, R., Croft, D. P. & Krause, J., 2009, In : Behavioral Ecology and Sociobiology. 63, 7, p. 989-997 9 p.

Research output: Contribution to journal › Article

social networks

network analysis

social network

skin (animal)

bananas

Protein rates of evolution are predicted by double-strand break events, independent of crossing-over rates

Weber, C. C. & Hurst, L. D., Sep 2009, In : Genome biology and evolution. 2009, p. 340-349 10 p.

Research output: Contribution to journal › Article

crossing over

Genetic Recombination

protein

Proteins

proteins

54 Citations (Scopus)

Quantification of social behavior in D. discoideum Reveals complex fixed and facultative strategies

Buttery, N. J., Rozen, D. E., Wolf, J. B. & Thompson, C. R. L., Aug 2009, In : Current Biology. 19, 16, p. 1373-1377 5 p.

Research output: Contribution to journal › Article

Social Behavior

social behavior

Spores

Genotype

Dictyostelium discoideum

Random fractals

Morters, P., 2009, New Perspectives in Stochastic Geometry. Kendall, W. & Molchanov, I. (eds.). London: Oxford University Press, p. 275-304 30 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

35 Citations (Scopus)

Random networks with sublinear preferential attachment: degree evolutions

Dereich, S. & Morters, P., 3 Jun 2009, In : Electronic Journal of Probability. 14, p. 1222-1267

Research output: Contribution to journal › Article

Preferential Attachment

Random Networks

Vertex of a graph

Directly proportional

Moderate Deviations

12 Citations (Scopus)

Recent advances on transdermal iontophoretic drug delivery and non-invasive sampling

Delgado-Charro, M. B., Mar 2009, In : Journal of Drug Delivery Science and Technology. 19, 2, p. 75-88 14 p.

Research output: Contribution to journal › Review article

Iontophoresis

Pharmaceutical Preparations

Drug Compounding

Skin Temperature

Drug Monitoring

361 Citations (Scopus)

55 Downloads (Pure)

Regulated fluctuations in Nanog expression mediate cell fate decisions in embryonic stem cells

Kalmar, T., Lim, C., Hayward, P., Muñoz-Descalzo, S., Nichols, J., Garcia-Ojalvo, J. & Martinez Arias, A., 1 Jul 2009, In : PLoS Biology. 7, 7, e1000149.

Research output: Contribution to journal › Article

Open Access

File

embryonic stem cells

Embryonic Stem Cells

Stem cells

Noise

Population

25 Citations (Scopus)

Relative contribution of additive, dominance and imprinting effects to phenotypic variation in body size and growth between divergent selection lines of mice

Hager, R., Cheverud, J. M. & Wolf, J. B., Feb 2009, In : Evolution. 63, 5, p. 1118 -1128 11 p.

Research output: Contribution to journal › Article

imprinting

genomic imprinting

Body Size

phenotypic variation

dominance (genetics)

28 Citations (Scopus)

Replication of long-bone length QTL in the F9-F10 LG,SM advanced intercross

Norgard, E. A., Jarvis, J. P., Roseman, C. C., Maxwell, T. J., Kenney-Hunt, J. P., Samocha, K. E., Pletscher, L. S., Wang, B., Fawcett, G. L., Leatherwood, C. J., Wolf, J. B. & Cheverud, J. M., Sep 2009, In : Mammalian Genome. 20, 4, p. 224-235 12 p.

Research output: Contribution to journal › Article

17 Citations (Scopus)

Representations underlying social learning and cultural evolution

Bryson, J. J., 2009, In : Interaction Studies. 10, 1, p. 77-100 24 p.

Research output: Contribution to journal › Article

Taxonomies

social learning

learning

taxonomy

Animals

13 Citations (Scopus)

Reverse iontophoresis of amino acids: identification and separation of stratum corneum and subdermal sources in vitro

Bouissou, C. C., Sylvestre, J-P., Guy, R. H. & Delgado-Charro, M. B., Dec 2009, In : Pharmaceutical Research. 26, 12, p. 2630-2638 9 p.

Research output: Contribution to journal › Article

Iontophoresis

Cornea

Amino Acids

Phosphates

In Vitro Techniques

30 Downloads (Pure)

SEA09: Software Engineering for Answer Set Programming

De Vos, M. (ed.) & Torsten, S. (ed.), Nov 2009, Bath, U. K.: Department of Computer Science, University of Bath. (Department of Computer Science Technical Report Series; no. CSBU-2009-20)

Research output: Book/Report › Other report

File

14 Citations (Scopus)

Selective abortion and the evolution of genomic imprinting

Wolf, J. B. & Hager, R., 2009, In : Journal of Evolutionary Biology. 22, 12, p. 2519-2523 5 p.

Research output: Contribution to journal › Article

imprinting

genomic imprinting

genomics

loci

genotype

15 Citations (Scopus)

Shear instability for stratified hydrostatic flows

Chumakova, L., Menzaque, F. E., Milewski, P. A., Rosales, R. R., Tabak, E. G. & Turner, C. V., Feb 2009, In : Communications on Pure and Applied Mathematics. 62, 2, p. 183-197 15 p.

Research output: Contribution to journal › Article

Stratified Flow

Hydrostatics

Stability criteria

Multilayers

Stability Criteria

19 Citations (Scopus)

81 Downloads (Pure)

Stability properties and nonlinear mappings of two and three-layer stratified flows

Chumakova, L., Menzaque, F. E., Milewski, P. A., Rosales, R. R., Tabak, E. G. & Turner, C. V., 2009, In : Studies in Applied Mathematics. 122, 2, p. 123-137 15 p.

Research output: Contribution to journal › Article

File

Stratified Flow

Nonlinear Mapping

Nonlinear Stability

Periodicity

Shear flow

26 Citations (Scopus)

82 Downloads (Pure)

Stochasticity in protein levels drives colinearity of gene order in metabolic operons of Escherichia coli

Kovacs, K., Hurst, L. D. & Papp, B., 26 May 2009, In : PLoS Biology. 7, 5, 9 p., e1000115.

Research output: Contribution to journal › Article

File

Gene Order

operon

Operon

Escherichia coli

Genes

110 Citations (Scopus)

Stripes and belly-spots: a review of pigment cell morphogenesis in vertebrates

Kelsh, R. N., Harris, M. L., Colanesi, S. & Erickson, C. A., 2009, In : Seminars in Cell & Developmental Biology. 20, 1, p. 90-104

Research output: Contribution to journal › Article

Melanophores

Zebrafish

Morphogenesis

Birds

Cell Movement

Testing in vivo the genetic regulatory network underlying melanocyte differentiation

Vibert, L., Rocco, A., Nikkaido, M., Greenhill, E. R. & Kelsh, R. N., 2009, In : Mechanisms of Development. 126, Supplement 1, p. S316-S317

Research output: Contribution to journal › Article