Centre for Mathematical Biology

Research Output 1977 2020

2009
2 Citations (Scopus)

Distribution, habitat and status of 'Endangered' Sakalava Rail of Madagascar

Rabenandrasana, M., Zefania, S., Long, P., Seing, S. T., Virginie, M. C., Randrianarisoa, M., Safford, R. & Szekely, T., 2009, In : Bird Conservation International. 19, 1, p. 23-32 10 p.

Research output: Contribution to journal › Article

Madagascar
wetlands
wetland
habitat
habitats
3 Citations (Scopus)
95 Downloads (Pure)

Does negative auto-regulation increase gene duplicability?

Warnecke, T., Wang, G. Z., Lercher, M. J. & Hurst, L. D., Aug 2009, In : BMC Evolutionary Biology. 9, 193.

Research output: Contribution to journal › Article

File
27 Citations (Scopus)
91 Downloads (Pure)

Dosage compensation on the active X chromosome minimizes transcriptional noise of X-linked genes in mammals

Yin, S., Wang, P., Deng, W., Zheng, H., Hu, L., Hurst, L. D. & Kong, X., 2009, In : Genome Biology. 10, 7, p. R74

Research output: Contribution to journal › Article

File

Epidemiological models with demographic Allee effect

Hilker, F. M., 2009, Biomat 2008: International Symposium on Mathematical and Computational Biology. Singapore: World Scientific, p. 52-77 26 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

demographic statistics
angle of incidence
extinction
infection
joint diseases
12 Citations (Scopus)

Eumalacostracan evolution: Conflict between three sources of data

Wills, M. A., Jenner, R. A. & Dhubhghaill, C. N., Jun 2009, In : Arthropod Systematics & Phylogeny. 67, 1, p. 71-90 20 p.

Research output: Contribution to journal › Article

Information Storage and Retrieval
fossils
Phylogeny
Anatomy
Oils
45 Citations (Scopus)
86 Downloads (Pure)

Eumalacostracan phylogeny and total evidence: limitations of the usual suspects

Jenner, R. A., Dhubhghaill, C. N., Ferla, M. P. & Wills, M. A., 27 Jan 2009, In : BMC Evolutionary Biology. 9, 20 p., 21.

Research output: Contribution to journal › Article

File
phylogeny
ribosomal RNA
phylogenetics
loci
cytochrome-c oxidase
4 Citations (Scopus)

Evaluating the performance of adapting trading strategies with different memory lengths

Krause, A., 2009, p. 711-718. 8 p.

Research output: Contribution to conference › Paper

Prediction model
Prediction
Trading strategies
Minorities
Assets

Evidence that replication-associated mutation alone does not explain between-chromosome differences in substitution rates

Pink, C. J., Swaminathan, S. K., Dunham, I., Rogers, J., Ward, A. & Hurst, L. D., May 2009, In : Genome biology and evolution. 2009, p. 13-22 10 p.

Research output: Contribution to journal › Article

chromosome
mutation
substitution
Chromosomes
chromosomes
9 Citations (Scopus)

Evolutionary genomics: A positive becomes a negative

Hurst, L. D., 29 Jan 2009, In : Nature. 457, 7229, p. 543-544 2 p.

Research output: Contribution to journal › Article

Genomics
12 Citations (Scopus)

Evolutionary genomics and the reach of selection

Hurst, L. D., Feb 2009, In : Journal of Biology. 8, 2, p. 12 1 p.

Research output: Contribution to journal › Article

20 Citations (Scopus)

Evolution of sexual size dimorphism in grouse and allies (Aves: Phasianidae) in relation to mating competition, fecundity demands and resource division

Lislevand, T., Figuerola, J. & Szekely, T., 2009, In : Journal of Evolutionary Biology. 22, 9, p. 1895-1905 11 p.

Research output: Contribution to journal › Article

Phasianidae
grouse
dimorphism
Aves
fecundity

Exploring Knowledge Dissemination as a Selective Force for Aggregation: Preliminary Results from Modelling Wild Asiatic Asses

Bryson, J. J., Kaczensky, P. & Powers, S. (ed.), Sep 2009.

Research output: Contribution to conference › Paper

2 Citations (Scopus)

Exploring the impact of target cell heterogeneity on HIV loads in a within-host model

Ward, Z. D., White, K. A. J. & van Voorn, G. A. K., 2009, In : Epidemics. 1, 3, p. 168-174 7 p.

Research output: Contribution to journal › Article

Viral Load
HIV
Pharmaceutical Preparations
Semen
Mutation
26 Citations (Scopus)

Extraction of amino acids by reverse iontophoresis in vivo

Sieg, A., Jeanneret, F., Fathi, M., Hochstrasser, D., Rudaz, S., Veuthey, J. L., Guy, R. H. & Delgado-Charro, M. B., 2009, In : European Journal of Pharmaceutics and Biopharmaceutics. 72, 1, p. 226-231 6 p.

Research output: Contribution to journal › Article

Iontophoresis
Amino Acids
Skin
Electrodes
Drug Monitoring

Fractal Geometry and Stochastics IV

Bandt, C. (ed.), Morters, P. (ed.) & Zaehle, M. (ed.), 2009, Basel: Birkhäuser. (Progress in Probability)

Research output: Book/Report › Book

Fractal Geometry
Fractal
Exceptional Sets
Scaling Limit
Statistical Physics
77 Citations (Scopus)

Fundamental concepts in genetics: Genetics and the understanding of selection

Hurst, L. D., 2009, In : Nature Reviews Genetics. 10, 2, p. 83-93 11 p.

Research output: Contribution to journal › Article

2 Citations (Scopus)

Generating optimal code using answer set programming

Crick, T., Brain, M., De Vos, M. & Fitch, J., 2009, Logic Programming and Nonmonotonic Reasoning. Erdem, E., Fangzhen, L. & Schaub, T. (eds.). Berlin, Germany: Springer, Vol. 5753. p. 554-559 6 p. (Lecture Notes in Computer Science).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Genetics and evolutionary consequences of maternal effects

Cheverud, J. M. & Wolf, J. B., Jun 2009, Maternal Effects in Mammals. Maestripieri, D. & Mateo, J. M. (eds.). Chicago University Press, p. 11-37 27 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

141 Citations (Scopus)

How is sexual conflict over parental care resolved? A meta-analysis

Harrison, F., Barta, Z., Cuthill, I. & Szekely, T., 2009, In : Journal of Evolutionary Biology. 22, 9, p. 1800-1812 13 p.

Research output: Contribution to journal › Article

sexual conflict
parental care
meta-analysis
birds
energy
1 Citation (Scopus)

Image-model coupling: a simple information theoretic perspective for image sequences

Smith, N. D., Mitchell, C. N. & Budd, C. J., 20 Mar 2009, In : Nonlinear Processes in Geophysics. 16, 2, p. 197-210 14 p.

Research output: Contribution to journal › Article

Open Access
Geophysics
Image matching
Image recognition
Ionosphere
output
26 Citations (Scopus)

Input-to-state stability of differential inclusions with applications to hysteretic and quantized feedback systems

Jayawardhana, B., Logemann, H. & Ryan, E. P., 2009, In : SIAM Journal on Control and Optimization. 48, 2, p. 1031-1054 24 p.

Research output: Contribution to journal › Article

Feedback Systems
Differential Inclusions
Feedback
Interconnection
Hysteresis Operators
30 Citations (Scopus)

In vivo transungual iontophoresis: effect of DC current application on ionic transport and on transonychial water loss

Dutet, J. & Delgado-Charro, M. B., 3 Dec 2009, In : Journal of Controlled Release. 140, 2, p. 117-125 9 p.

Research output: Contribution to journal › Article

Iontophoresis
Water
Nails
Skin
Sodium Chloride
47 Citations (Scopus)

Kentish versus Snowy Plover: Phenotypic and genetic analyses of Charadrius alexandrinus reveal divergence of Eurasian and American subspecies

Kupper, C., Augustin, J., Kosztolanyi, A., Burke, T., Figuerola, J. & Szekely, T., 2009, In : Auk. 126, 4, p. 839-852 14 p.

Research output: Contribution to journal › Article

Charadrius alexandrinus
subspecies
divergence
wader
Charadriidae
8 Citations (Scopus)
92 Downloads (Pure)

Learning and herding using case-based decisions with local interactions

Krause, A., May 2009, In : IEEE Transactions on Systems Man and Cybernetics - Part A: Systems and Humans. 39, 3, p. 662-669

Research output: Contribution to journal › Article

File
Decision theory
41 Citations (Scopus)
98 Downloads (Pure)

Ligand-independent traffic of notch buffers activated armadillo in Drosophila

Sanders, P. G. T., Muñoz-Descalzo, S., Balayo, T., Wirtz-Peitz, F., Hayward, P. & Martinez Arias, A., 11 Aug 2009, In : PLoS Biology. 7, 8, 18 p., e1000169.

Research output: Contribution to journal › Article

Open Access
File
Armadillos
Notch Receptors
Dasypodidae
traffic
Drosophila
5 Citations (Scopus)

Measure changes with extinction

Harris, S. C. & Roberts, M. I., 15 Apr 2009, In : Statistics & Probability Letters. 79, 8, p. 1129-1133 5 p.

Research output: Contribution to journal › Article

Melanocytes, modeling and maths - do we really understand differentiation?

Greenhill, E., Rocco, A., Nikaido, M. & Kelsh, R. N., 2009, In : Pigment Cell & Melanoma Research. 22, 5, p. 21

Research output: Contribution to journal › Article

Method for non-invasively determining the relative levels of two biological substances. B2

Delgado-Charro, M. & Guy, R., 30 Jun 2009, Patent No. US7555337, Priority date 17 Jun 2001, Priority No. EP01114750

Research output: Patent

Method for non-invasively determining the relative levels of two substances present in a biological system. C

Delgado-Charro, M. & Guy, R., 18 Aug 2009, IPC No. A61B5/00; A61N1/30, Patent No. CA2450965, Priority date 22 Jun 2001, Priority No. EP01114750

Research output: Patent

56 Citations (Scopus)
99 Downloads (Pure)

Modeling spatiotemporal forest health monitoring data

Augustin, N. H., Musio, M., von Wilpert, K., Kublin, E., Wood, S. N. & Schumacher, M., Sep 2009, In : Journal of the American Statistical Association. 104, 487, p. 899-911 13 p.

Research output: Contribution to journal › Article

Open Access
File
Spatio-temporal Modeling
Health Monitoring
Defoliation
Space-time
Pollution
6 Citations (Scopus)

Modelling normative frameworks using answer set programing

Cliffe, O., De Vos, M. & Padget, J., 2009, Logic Programming and Nonmonotonic Reasoning. Erdem, E., Fangzhen, L. & Schaub, T. (eds.). Berlin, Germany: Springer, Vol. 5753. p. 548-553 6 p. (Lecture Notes in Computer Science).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Semantics
Formal verification
23 Citations (Scopus)

Modulated and localized states in a finite domain

Dawes, J. H. P., 2009, In : SIAM Journal on Applied Dynamical Systems. 8, 3, p. 909-930 22 p.

Research output: Contribution to journal › Article

16 Citations (Scopus)

Monoallelic expression and tissue specificity are associated with high crossover rates

Necsulea, A., Semon, M., Duret, L. & Hurst, L. D., Dec 2009, In : Trends in Genetics. 25, 12, p. 519-522 4 p.

Research output: Contribution to journal › Article

Organ Specificity
Genetic Recombination
Genes
Human Genome
40 Citations (Scopus)

Moving mesh generation using the parabolic Monge–Ampère equation

Budd, C. J. & Williams, J. F., 2009, In : SIAM Journal on Scientific Computing. 31, 5, p. 3438-3465 28 p.

Research output: Contribution to journal › Article

Moving Mesh
Monge-Ampère Equation
Mesh generation
Mesh Generation
Partial differential equations

Multiple Intersection Exponents for Planar Brownian Motion

Klenke, A. & Morters, P., 2009, In : Journal of Statistical Physics. 136, 2, p. 373-397 25 p.

Research output: Contribution to journal › Article

27 Citations (Scopus)
176 Downloads (Pure)

Negotiation between parents over care: reversible compensation during incubation

Kosztolanyi, A., Cuthill, I. C. & Szekely, T., 2009, In : Behavioral Ecology. 20, 2, p. 446-452 7 p.

Research output: Contribution to journal › Article

File
Charadrius alexandrinus
nest
incubation
parental role
nests
116 Citations (Scopus)

Network structure and parasite transmission in a group living lizard, the gidgee skink, Egernia stokesii

Godfrey, S. S., Bull, C. M., James, R. & Murray, K., May 2009, In : Behavioral Ecology and Sociobiology. 63, 7, p. 1045-1056 12 p.

Research output: Contribution to journal › Article

parasite transmission
Scincidae
lizard
lizards
tick
37 Citations (Scopus)
100 Downloads (Pure)

Noisy splicing, more than expression regulation, explains why some exons are subject to nonsense-mediated mRNA decay

Zhang, Z. G., Xin, D. D., Wang, P., Zhou, L., Hu, L. D., Kong, X. Y. & Hurst, L. D., 14 May 2009, In : BMC Biology. 7, 23

Research output: Contribution to journal › Article

File
Nonsense Mediated mRNA Decay
exons
Exons
Nonsense Codon
deterioration
5 Citations (Scopus)

Old nests are cues for suitable breeding sites in the Eurasian penduline tit Remiz pendulinus

Gergely, Z., Meszaros, L. A., Szabad, J. & Szekely, T., 2009, In : Journal of Avian Biology. 40, 1, p. 2-6 5 p.

Research output: Contribution to journal › Article

breeding site
breeding sites
nest
nests
nest site
80 Citations (Scopus)

Physiology of mycobacteria

Cook, G. M., Berney, M., Gebhard, S., Heinemann, M., Cox, R. A., Danilchanka, O. & Niederweiss, M., 2009, Advances in Microbial Physiology. Elsevier, Vol. 55. p. 81-182

Research output: Chapter in Book/Report/Conference proceeding › Chapter

99 Citations (Scopus)

Potential banana skins in animal social network analysis

James, R., Croft, D. P. & Krause, J., 2009, In : Behavioral Ecology and Sociobiology. 63, 7, p. 989-997 9 p.

Research output: Contribution to journal › Article

social networks
network analysis
social network
skin (animal)
bananas

Protein rates of evolution are predicted by double-strand break events, independent of crossing-over rates

Weber, C. C. & Hurst, L. D., Sep 2009, In : Genome biology and evolution. 2009, p. 340-349 10 p.

Research output: Contribution to journal › Article

crossing over
Genetic Recombination
protein
Proteins
proteins
55 Citations (Scopus)

Quantification of social behavior in D. discoideum Reveals complex fixed and facultative strategies

Buttery, N. J., Rozen, D. E., Wolf, J. B. & Thompson, C. R. L., Aug 2009, In : Current Biology. 19, 16, p. 1373-1377 5 p.

Research output: Contribution to journal › Article

Social Behavior
social behavior
Spores
Genotype
Dictyostelium discoideum

Random fractals

Morters, P., 2009, New Perspectives in Stochastic Geometry. Kendall, W. & Molchanov, I. (eds.). London: Oxford University Press, p. 275-304 30 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

35 Citations (Scopus)

Random networks with sublinear preferential attachment: degree evolutions

Dereich, S. & Morters, P., 3 Jun 2009, In : Electronic Journal of Probability. 14, p. 1222-1267

Research output: Contribution to journal › Article

Preferential Attachment
Random Networks
Vertex of a graph
Directly proportional
Moderate Deviations
12 Citations (Scopus)

Recent advances on transdermal iontophoretic drug delivery and non-invasive sampling

Delgado-Charro, M. B., Mar 2009, In : Journal of Drug Delivery Science and Technology. 19, 2, p. 75-88 14 p.

Research output: Contribution to journal › Review article

Iontophoresis
Pharmaceutical Preparations
Drug Compounding
Skin Temperature
Drug Monitoring
365 Citations (Scopus)
65 Downloads (Pure)

Regulated fluctuations in Nanog expression mediate cell fate decisions in embryonic stem cells

Kalmar, T., Lim, C., Hayward, P., Muñoz-Descalzo, S., Nichols, J., Garcia-Ojalvo, J. & Martinez Arias, A., 1 Jul 2009, In : PLoS Biology. 7, 7, e1000149.

Research output: Contribution to journal › Article

Open Access
File
embryonic stem cells
Embryonic Stem Cells
Stem cells
Noise
Population
25 Citations (Scopus)

Relative contribution of additive, dominance and imprinting effects to phenotypic variation in body size and growth between divergent selection lines of mice

Hager, R., Cheverud, J. M. & Wolf, J. B., Feb 2009, In : Evolution. 63, 5, p. 1118 -1128 11 p.

Research output: Contribution to journal › Article

imprinting
genomic imprinting
Body Size
phenotypic variation
dominance (genetics)
28 Citations (Scopus)

Replication of long-bone length QTL in the F9-F10 LG,SM advanced intercross

Norgard, E. A., Jarvis, J. P., Roseman, C. C., Maxwell, T. J., Kenney-Hunt, J. P., Samocha, K. E., Pletscher, L. S., Wang, B., Fawcett, G. L., Leatherwood, C. J., Wolf, J. B. & Cheverud, J. M., Sep 2009, In : Mammalian Genome. 20, 4, p. 224-235 12 p.

Research output: Contribution to journal › Article

17 Citations (Scopus)

Representations underlying social learning and cultural evolution

Bryson, J. J., 2009, In : Interaction Studies. 10, 1, p. 77-100 24 p.

Research output: Contribution to journal › Article

Taxonomies
social learning
learning
taxonomy
Animals