Research Output 1977 2019

2018
6 Citations (Scopus)
30 Downloads (Pure)

Spatially extended hybrid methods: A review

Smith, C. A. & Yates, C. A., 28 Feb 2018, In : Journal of the Royal Society, Interface. 15, 139, 20170931.

Research output: Contribution to journalReview article

Open Access
File
Partial differential equations
Physics
Mathematics
Research
Direction compound
2 Citations (Scopus)

Stability of periodic traveling flexural-gravity waves in two dimensions

Trichtchenko, O., Milewski, P., Părău, E. & Vanden-Broeck, J. M., 12 Oct 2018, In : Studies in Applied Mathematics. 26 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Stochastic and Deterministic Modelling of Cell Migration

Gavagnin, E. & Yates, C., 19 Jul 2018, Integrated Population Biology and Modeling. Rao, A. S. R. & Srinivasa, R. C. R. (eds.). Elsevier, p. 37-91 55 p. (Handbook of Statistics ; vol. 39).

Research output: Chapter in Book/Report/Conference proceedingChapter

Cell Migration
Cell
Modeling
Agent-based Model
Continuum
3 Citations (Scopus)
22 Downloads (Pure)

Technology networks: the autocatalytic origins of innovation

Napolitano, L., Evangelou, E., Pugliese, E., Zeppini, P. & Room, G., 18 Jun 2018, In : Royal Society Open Science. 5, 6, RSOS-172445 .

Research output: Contribution to journalArticle

Open Access
File
Innovation
Patents
Node
Patenting
Reinforcement
6 Citations (Scopus)
22 Downloads (Pure)

Tetrad analysis in plants and fungi finds large differences in gene conversion rates but no GC bias

Hurst, L., 1 Jan 2018, In : Nature Ecology & Evolution. 2, 1, p. 164-173 10 p.

Research output: Contribution to journalArticle

Open Access
File
plant and fungus
gene conversion
recombination
fungi
gene
2 Citations (Scopus)
17 Downloads (Pure)

The effect of population abundances on the stability of large random ecosystems

Gibbs, T., Grilli, J., Rogers, T. & Allesina, S., 27 Aug 2018, In : Physical Review E. 98, 2, p. 1 - 16 16 p., 022410.

Research output: Contribution to journalArticle

Open Access
File
ecosystems
matrices
perturbation
ecology
matrix theory
6 Downloads (Pure)
Open Access
File
Cell Migration
Invasion
Cell Cycle
cell movement
Cell Movement
Open Access
File
Cell Migration
Invasion
Cell Cycle
cell movement
Cell Movement
1 Citation (Scopus)
16 Downloads (Pure)

The semi-infinite asymmetric exclusion process: Large deviations via matrix products

Gonzalez Duhart Muñoz De Cote, H., Morters, P. & Zimmer, J., 1 Apr 2018, In : Potential Analysis. 48, 3, p. 301-323

Research output: Contribution to journalArticle

Open Access
File
Asymmetric Exclusion Process
Matrix Product
Large Deviations
Stationary Measure
Product Measure
8 Downloads (Pure)

Topical bio(in)equivalence of metronidazole formulations in vivo

Pedon de Araujo, T., Moura Fittipaldi, I., Galindo Bedor, D. C., Ludna Duarte, M., Cordery, S., Guy, R., Delgado-Charro, M., Pereira de Santana, D. & Bastos Leal, L., 25 Apr 2018, In : International Journal of Pharmaceutics. 541, p. 167-172 6 p.

Research output: Contribution to journalArticle

Open Access
File
Metronidazole
Cornea
Skin
Pharmaceutical Preparations
Biological Availability
17 Downloads (Pure)

Universality in a class of fragmentation-coalescence processes

Kyprianou, A. E., Pagett, S. W. & Rogers, T., 1 May 2018, In : Annales de l'Institut Henri Poincaré: Probabilités et Statistiques. 54, 2, p. 1134-1151

Research output: Contribution to journalArticle

Open Access
File
Coalescence
Fragmentation
Universality
Breakup
Thermodynamic Limit
5 Citations (Scopus)

When small data beats big data

Faraway, J. & Augustin, N., 1 May 2018, In : Statistics & Probability Letters. 136, p. 142-145 4 p.

Research output: Contribution to journalArticle

Beat
Large Data
Costs
Statistical Inference
Data Acquisition
2017
1 Citation (Scopus)
Open Access
Bacterial Genes
Terminator Codon
stop codon
Adenine
adenine
14 Citations (Scopus)

Adult sex ratio and operational sex ratio exhibit different temporal dynamics in the wild

Carmona-Isunza, M. C., Ancona, S., Székely, T., Ramallo-González, A. P., Cruz-López, M., Serrano-Meneses, M. A. & Küpper, C., 1 Apr 2017, In : Behavioral Ecology. 28, 2, p. 523-532 10 p.

Research output: Contribution to journalArticle

sex ratio
reproductive strategy
breeding population
sexual selection
breeding season
8 Citations (Scopus)

Adult sex ratios and reproductive strategies: A critical re-examination of sex differences in human and animal societies

Schacht, R., Kramer, K. L., Székely, T. & Kappeler, P. M., 19 Sep 2017, In : Proceedings of the Royal Society B: Biological Sciences. 372, 1729, 20160309.

Research output: Contribution to journalEditorial

Sex Ratio
gender differences
Sex Characteristics
reproductive strategy
sex ratio
6 Citations (Scopus)

Adult sex ratios and their implications for cooperative breeding in birds

Komdeur, J., Székely, T., Long, X. & Kingma, S. A., 19 Sep 2017, In : Proceedings of the Royal Society B: Biological Sciences. 372, 1729, 20160322.

Research output: Contribution to journalArticle

cooperative breeding
Sex Ratio
Birds
sex ratio
Breeding

A flexible multivariate random effects proportional odds model with application to adverse effects during radiation therapy

Augustin, N., Kim, S. W., Uhlig, A., Hanser, C., Henke, M. & Schumacher, M., 15 Nov 2017, In : Biometrical Journal. 59, 6, p. 1339–1351 201600142.

Research output: Contribution to journalArticle

Proportional Odds Model
Radiation Therapy
Random Effects Model
Dose
Radiation

Agent-Based Modelling

Gallagher, E. & Bryson, J. J., 7 Nov 2017, (Accepted/In press) Encyclopedia of Animal Cognition and Behavior. Springer

Research output: Chapter in Book/Report/Conference proceedingChapter

69 Downloads (Pure)

A machine-compiled microbial supertree from figure-mining thousands of papers

Mounce, R., Murray-Rust, P. & Wills, M., 9 May 2017, In : Research Ideas and Outcomes. 3, e13589.

Research output: Contribution to journalArticle

File
taxonomy
microbiology
phylogeny
prokaryotic cells
synthesis
4 Citations (Scopus)
60 Downloads (Pure)

A Mobile Agent Routing Protocol for Data Aggregation in Wireless Sensor Networks

Pourroostaei Ardakani, S., Padget, J. & De Vos, M., Mar 2017, In : International Journal of Wireless Information Networks. 24, 1, p. 27-41

Research output: Contribution to journalArticle

Open Access
File
Mobile agents
Routing protocols
Wireless sensor networks
Agglomeration
Network protocols
9 Citations (Scopus)
29 Downloads (Pure)

A multi-stage representation of cell proliferation as a Markov process

Yates, C., Ford, M. & Mort, R., 1 Dec 2017, In : Bulletin of Mathematical Biology. 79, 12, p. 2905–2928 24 p.

Research output: Contribution to journalArticle

Open Access
Markov Chains
Cell Proliferation
Cell proliferation
Cell Cycle
Markov Process
1 Citation (Scopus)

Analysis of spatial mobility in subjects from a dengue endemic urban locality in Morelos State, Mexico

Falcón-Lezama, J. A., Santos-Luna, R., Román-Pérez, S., Martínez-Vega, R. A., Herrera-Valdez, M. A., Kuri-Morales, Á. F., Adams, B., Kuri-Morales, P. A., López-Cervantes, M. & Ramos-Castañeda, J., 22 Feb 2017, In : PLoS ONE. 12, 2, e0172313.

Research output: Contribution to journalArticle

Open Access
Spatial Analysis
dengue
Dengue
Mexico
Dengue virus

A necessary condition for dispersal driven growth of populations with discrete patch dynamics

Guiver, C., Packman, D. & Townley, S., 7 Jul 2017, In : Journal of Theoretical Biology. 424, p. 11-25

Research output: Contribution to journalArticle

Open Access
Population Growth
Patch
population growth
Necessary Conditions
Growth
6 Citations (Scopus)
47 Downloads (Pure)

An ongoing role for Wnt signaling in differentiating melanocytes in vivo

Vibert, L., Aquino, G., Gehring, I., Subkhankulova, T., Schilling, T. F., Rocco, A. & Kelsh, R., Mar 2017, In : Pigment Cell & Melanoma Research. 30, 2, p. 219-232

Research output: Contribution to journalArticle

Open Access
File
3 Citations (Scopus)

A phase-plane analysis of localized frictional waves

Putelat, T., Dawes, J. H. P. & Champneys, A. R., 5 Jul 2017, In : Proceedings of the Royal Society A: Mathematical Physical and Engineering Sciences. 473, 2203, p. 1 - 27 27 p., 0606.

Research output: Contribution to journalArticle

Open Access
Phase Plane Analysis
friction
Friction
slip
Well-posed Problem
2 Citations (Scopus)

A phase transition in excursions from infinity of the "fast" fragmentation-coalescence process

Kyprianou, A., Rogers, T., Pagett, S. & Schweinsberg, J., 27 Nov 2017, In : Annals of Probablitiy. 45, 6A, p. 3829-3849

Research output: Contribution to journalArticle

Open Access
Excursion
Coalescence
Fragmentation
Phase Transition
Infinity
13 Citations (Scopus)

A polychromatic 'greenbeard' locus determines patterns of cooperation in a social amoeba

Gruenheit, N., Parkinson, K., Stewart, B., Howie, J. A., Wolf, J. B. & Thompson, C. R. L., 25 Jan 2017, In : Nature Communications. 8, 14171.

Research output: Contribution to journalArticle

Open Access
amoeba
Amoeba
loci
Polymorphism
Costs and Cost Analysis

A Road-to-Market Analysis for Non-Small Cell Lung Cancer Products: Tyrosine Kinase Inhibitors as a Case Study

Delgado-Charro, M., Tognana, E., Francesco, P. & De Vries, C., 2017, (Accepted/In press).

Research output: Contribution to conferencePoster

4 Citations (Scopus)

A structural variant in the 5′-flanking region of the TWIST2 gene affects melanocyte development in belted cattle

Awasthi Mishra, N., Droegemueller, C., Jagannathan, V., Keller, I., Wuthrich, D., Bruggmann, R., Beck, J., Schuetz, E., Brenig, B., Demmel, S., Moser, S., Signer-Hasler, H., Pienkowska-Schelling, A., Schelling, C., Sande, M., Rongen, R., Rieder, S., Kelsh, R. N., Mercader, N. & Leeb, T., 28 Jun 2017, In : PLoS ONE. 12, 6, 16 p., e0180170.

Research output: Contribution to journalArticle

Open Access
melanocytes
5' Flanking Region
Melanocytes
Genes
neural crest
1 Citation (Scopus)

A temperature compensation method for chlorophyll and phycocyanin fluorescence sensors in freshwater

Watras, C. J., Morrison, K. A., Rubsam, J. L., Hanson, P. C., Watras, A. J., Laliberte, G. D. & Milewski, P., Jul 2017, In : Limnology and Oceanography: Methods. 15, 7, p. 642-652

Research output: Contribution to journalArticle

Chlorophyll
Fluorescence
Sensors
Temperature
Compensation and Redress
1 Citation (Scopus)
60 Downloads (Pure)

Automated multi-level governance compliance checking

King, T. C., De Vos, M., Dignum, V., Jonker, C. M., Li, T., Padget, J. & van Riemsdijk, M. B., 30 Nov 2017, In : Autonomous Agents and Multi-Agent Systems. 31, 6, p. 1283-1343 61 p.

Research output: Contribution to journalArticle

Open Access
File
Compliance
Concretes
Semantics
Acoustic waves
7 Citations (Scopus)

Bioequivalence methodologies for topical drug products: in vitro and ex vivo studies with a cortiscosteroid and an anti-fungal drug

Bastos Leal, L., Cordery, S. F., Delgado-Charro, M. B., Bunge, A. L. & Guy, R. H., Apr 2017, In : Pharmaceutical Research. 34, 4, p. 730-737 8 p.

Research output: Contribution to journalArticle

Open Access
10 Citations (Scopus)
77 Downloads (Pure)

Both maintenance and avoidance of RNA-binding protein interactions constrain coding region evolution

Savisaar, R. & Hurst, L., 1 May 2017, In : Molecular Biology and Evolution. 34, 5, p. 1110-1126

Research output: Contribution to journalArticle

Open Access
File
RNA-binding proteins
RNA-Binding Proteins
RNA
Maintenance
protein
1 Citation (Scopus)
54 Downloads (Pure)

Branching Brownian motion with absorption and the all-time minimum of branching Brownian motion with drift

Berestycki, J., Brunet, É., Harris, S. C. & Miłoś, P., 15 Sep 2017, In : Journal of Functional Analysis. 273, 6, p. 2107-2143 37 p.

Research output: Contribution to journalArticle

Open Access
File
Branching Brownian Motion
Brownian Motion with Drift
Absorption
Real Line
Traveling Wave

Characterizing tipping in a stochastic reduced stommel-type model in higher-dimensions

Budd, C., Glendinning, P., Hill, K. & Kuske, R., 2017, Extended Abstracts Spring 2016: Non Smooth Dynamics. Columbo, A., Jeffrey, M. R., Lazaro, J. T. & Olm, J. M. (eds.). Birkhauser, p. 25-29 5 p. (Trends in Mathematics; vol. 8).

Research output: Chapter in Book/Report/Conference proceedingChapter

Higher Dimensions
Climate Modeling
Model
Climate Models
Conceptual Model
12 Citations (Scopus)

Comparative analyses of selection operating on non-translated intergenic regions of diverse bacterial species

Thorpe, H. A., Bayliss, S. C., Hurst, L. D. & Feil, E. J., 5 May 2017, In : Genetics. 206, 1, p. 363-376 195784.

Research output: Contribution to journalArticle

Intergenic DNA
Genome
Staphylococcal Pneumonia
Bacterial Genomes
Untranslated RNA
2 Citations (Scopus)
45 Downloads (Pure)

Demographic noise slows down cycles of dominance

Yang, Q., Rogers, T. & Dawes, J. H. P., 7 Nov 2017, In : Journal of Theoretical Biology. 432, p. 157-168 12 p.

Research output: Contribution to journalArticle

Open Access
File
Mutation Rate
Noise
Mutation
demographic statistics
Demography
12 Citations (Scopus)
63 Downloads (Pure)

Dental data perform relatively poorly in reconstructing mammal phylogenies: Morphological partitions evaluated with molecular benchmarks

Sansom, R. S., Wills, M. A. & Williams, T., Sep 2017, In : Systematic Biology. 66, 5, p. 813-822 10 p.

Research output: Contribution to journalArticle

Open Access
File
Benchmarking
Phylogeny
Mammals
Tooth
teeth
4 Citations (Scopus)

Depletion of somatic mutations in splicing-associated sequences in cancer genomes

Hurst, L. & Batada, N. N., 7 Nov 2017, In : Genome Biology. 18, 1, 12 p., 213.

Research output: Contribution to journalArticle

Open Access
somatic mutation
mutation
cancer
genome
Genome
12 Citations (Scopus)
202 Downloads (Pure)

Designing and implementing transparency for real time inspection of autonomous robots

Theodorou, A., Wortham, R. H. & Bryson, J. J., 30 May 2017, In : Connection Science. 29, 3, p. 230-241 12 p.

Research output: Contribution to journalArticle

Open Access
File
Transparency
Inspection
Robots
Robotics
Intelligent agents

Diagnostics of circumstellar grains in geometric models – I. Structure and composition

Dawes, J. & Greaves, J. S., 11 May 2017, In : Monthly Notices of the Royal Astronomical Society. 467, 1, p. 218-225 8 p.

Research output: Contribution to journalArticle

Open Access
spectral energy distribution
dust
energy
wavelength
inclusions
3 Citations (Scopus)

Differences between hard and soft phylogenetic data

Sansom, R. S. & Wills, M. A., 20 Dec 2017, In : Proceedings of the Royal Society B: Biological Sciences. 284, 1869, 20172150.

Research output: Contribution to journalArticle

Open Access
Mammals
Bivalvia
Birds
Phylogeny
Fish
7 Citations (Scopus)
30 Downloads (Pure)
Open Access
File
Stochastic Dynamical Systems
Dimension Reduction
biology
dynamical systems
Biology
12 Citations (Scopus)

Direct determination of the mutation rate in the bumblebee reveals evidence for weak recombination-associated mutation and an approximate rate constancy in insects

Liu, H., Jia, Y., Sun, X., Tian, D., Hurst, L. D. & Yang, S., 1 Jan 2017, In : Molecular Biology and Evolution. 34, 1, p. 119-130 12 p.

Research output: Contribution to journalArticle

Open Access
constancy
Bombus
Mutation Rate
Genetic Recombination
recombination
6 Citations (Scopus)

Disturbed Placental Imprinting in Preeclampsia Leads to Altered Expression of DLX5, a Human-Specific Early Trophoblast Marker

Hurst, L., 7 Nov 2017, In : Circulation. 136, 19, p. 1824-1839 16 p.

Research output: Contribution to journalArticle

Open Access
Trophoblasts
Pre-Eclampsia
Placenta
Genes
Transcriptome

Do antibiotics and antibiotic resistance genes play a role in enhancing antimicrobial resistance in wastewater?

Castrignano, E., Feil, E., Lewis, S., Cartwright, N., Barden, R. & Kasprzyk-Hordern, B., 2017.

Research output: Contribution to conferencePoster

3 Citations (Scopus)

Draft genome sequences of Salinivibrio proteolyticus, Salinivibrio sharmensis, Salinivibrio siamensis, Salinivibrio costicola subsp. alcaliphilus, Salinivibrio costicola subsp. vallismortis, and 29 new isolates belonging to the genus Salinivibrio

López-Hermoso, C., de la Haba, R. R., Cristina Sánchez-Porro, S-P., Bayliss, S. C., Feil, E. J. & Ventosa, A., 1 Jul 2017, In : Genome announcements. 5, 27, e00244-17.

Research output: Contribution to journalArticle

Open Access
Genome
Base Composition
Open Reading Frames
Ecosystem
21 Citations (Scopus)

Dual-specificity phosphatase 5 controls the localized inhibition, propagation, and transforming potential of ERK signaling

Kidger, A. M., Rushworth, L. K., Stellzig, J., Davidson, J., Bryant, C. J., Bayley, C., Caddye, E., Rogers, T., Keyse, S. M. & Caunt, C. J., 17 Jan 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 3, p. E317-E326

Research output: Contribution to journalArticle

Open Access
Dual-Specificity Phosphatases
Extracellular Signal-Regulated MAP Kinases
Phosphotransferases
Cell Proliferation
Cell Aging
77 Downloads (Pure)
Open Access
File