Research Output 1977 2019

2017
14 Citations (Scopus)

Adult sex ratio and operational sex ratio exhibit different temporal dynamics in the wild

Carmona-Isunza, M. C., Ancona, S., Székely, T., Ramallo-González, A. P., Cruz-López, M., Serrano-Meneses, M. A. & Küpper, C., 1 Apr 2017, In : Behavioral Ecology. 28, 2, p. 523-532 10 p.

Research output: Contribution to journalArticle

sex ratio
reproductive strategy
breeding population
sexual selection
breeding season
8 Citations (Scopus)

Adult sex ratios and reproductive strategies: A critical re-examination of sex differences in human and animal societies

Schacht, R., Kramer, K. L., Székely, T. & Kappeler, P. M., 19 Sep 2017, In : Proceedings of the Royal Society B: Biological Sciences. 372, 1729, 20160309.

Research output: Contribution to journalEditorial

Sex Ratio
gender differences
Sex Characteristics
reproductive strategy
sex ratio
5 Citations (Scopus)

Adult sex ratios and their implications for cooperative breeding in birds

Komdeur, J., Székely, T., Long, X. & Kingma, S. A., 19 Sep 2017, In : Proceedings of the Royal Society B: Biological Sciences. 372, 1729, 20160322.

Research output: Contribution to journalArticle

cooperative breeding
Sex Ratio
Birds
sex ratio
Breeding

A flexible multivariate random effects proportional odds model with application to adverse effects during radiation therapy

Augustin, N., Kim, S. W., Uhlig, A., Hanser, C., Henke, M. & Schumacher, M., 15 Nov 2017, In : Biometrical Journal. 59, 6, p. 1339–1351 201600142.

Research output: Contribution to journalArticle

Proportional Odds Model
Radiation Therapy
Random Effects Model
Dose
Radiation

Agent-Based Modelling

Gallagher, E. & Bryson, J. J., 7 Nov 2017, (Accepted/In press) Encyclopedia of Animal Cognition and Behavior. Springer

Research output: Chapter in Book/Report/Conference proceedingChapter

A machine-compiled microbial supertree from figure-mining thousands of papers

Mounce, R., Murray-Rust, P. & Wills, M., 9 May 2017, In : Research Ideas and Outcomes. 3, e13589.

Research output: Contribution to journalArticle

File
taxonomy
microbiology
phylogeny
prokaryotic cells
synthesis
4 Citations (Scopus)

A Mobile Agent Routing Protocol for Data Aggregation in Wireless Sensor Networks

Pourroostaei Ardakani, S., Padget, J. & De Vos, M., Mar 2017, In : International Journal of Wireless Information Networks. 24, 1, p. 27-41

Research output: Contribution to journalArticle

Open Access
File
Mobile agents
Routing protocols
Wireless sensor networks
Agglomeration
Network protocols
9 Citations (Scopus)

A multi-stage representation of cell proliferation as a Markov process

Yates, C., Ford, M. & Mort, R., 1 Dec 2017, In : Bulletin of Mathematical Biology. 79, 12, p. 2905–2928 24 p.

Research output: Contribution to journalArticle

Open Access
File
Markov Chains
Cell Proliferation
Cell proliferation
Cell Cycle
Markov Process

Analysis of spatial mobility in subjects from a dengue endemic urban locality in Morelos State, Mexico

Falcón-Lezama, J. A., Santos-Luna, R., Román-Pérez, S., Martínez-Vega, R. A., Herrera-Valdez, M. A., Kuri-Morales, Á. F., Adams, B., Kuri-Morales, P. A., López-Cervantes, M. & Ramos-Castañeda, J., 22 Feb 2017, In : PLoS ONE. 12, 2, e0172313.

Research output: Contribution to journalArticle

Open Access
Spatial Analysis
dengue
Dengue
Mexico
Dengue virus

A necessary condition for dispersal driven growth of populations with discrete patch dynamics

Guiver, C., Packman, D. & Townley, S., 7 Jul 2017, In : Journal of Theoretical Biology. 424, p. 11-25

Research output: Contribution to journalArticle

Open Access
Population Growth
Patch
population growth
Necessary Conditions
Growth
6 Citations (Scopus)

An ongoing role for Wnt signaling in differentiating melanocytes in vivo

Vibert, L., Aquino, G., Gehring, I., Subkhankulova, T., Schilling, T. F., Rocco, A. & Kelsh, R., Mar 2017, In : Pigment Cell & Melanoma Research. 30, 2, p. 219-232

Research output: Contribution to journalArticle

Open Access
File
2 Citations (Scopus)

A phase-plane analysis of localized frictional waves

Putelat, T., Dawes, J. H. P. & Champneys, A. R., 5 Jul 2017, In : Proceedings of the Royal Society A: Mathematical Physical and Engineering Sciences. 473, 2203, p. 1 - 27 27 p., 0606.

Research output: Contribution to journalArticle

Open Access
Phase Plane Analysis
friction
Friction
slip
Well-posed Problem

A phase transition in excursions from infinity of the "fast" fragmentation-coalescence process

Kyprianou, A., Rogers, T., Pagett, S. & Schweinsberg, J., 27 Nov 2017, In : Annals of Probablitiy. 45, 6A, p. 3829-3849

Research output: Contribution to journalArticle

Open Access
Excursion
Coalescence
Fragmentation
Phase Transition
Infinity
11 Citations (Scopus)

A polychromatic 'greenbeard' locus determines patterns of cooperation in a social amoeba

Gruenheit, N., Parkinson, K., Stewart, B., Howie, J. A., Wolf, J. B. & Thompson, C. R. L., 25 Jan 2017, In : Nature Communications. 8, 14171.

Research output: Contribution to journalArticle

Open Access
amoeba
Amoeba
loci
Polymorphism
Costs and Cost Analysis

A Road-to-Market Analysis for Non-Small Cell Lung Cancer Products: Tyrosine Kinase Inhibitors as a Case Study

Delgado-Charro, M., Tognana, E., Francesco, P. & De Vries, C., 2017, (Accepted/In press).

Research output: Contribution to conferencePoster

3 Citations (Scopus)

A structural variant in the 5′-flanking region of the TWIST2 gene affects melanocyte development in belted cattle

Awasthi Mishra, N., Droegemueller, C., Jagannathan, V., Keller, I., Wuthrich, D., Bruggmann, R., Beck, J., Schuetz, E., Brenig, B., Demmel, S., Moser, S., Signer-Hasler, H., Pienkowska-Schelling, A., Schelling, C., Sande, M., Rongen, R., Rieder, S., Kelsh, R. N., Mercader, N. & Leeb, T., 28 Jun 2017, In : PLoS ONE. 12, 6, 16 p., e0180170.

Research output: Contribution to journalArticle

Open Access
melanocytes
5' Flanking Region
Melanocytes
Genes
neural crest
1 Citation (Scopus)

A temperature compensation method for chlorophyll and phycocyanin fluorescence sensors in freshwater

Watras, C. J., Morrison, K. A., Rubsam, J. L., Hanson, P. C., Watras, A. J., Laliberte, G. D. & Milewski, P., Jul 2017, In : Limnology and Oceanography: Methods. 15, 7, p. 642-652

Research output: Contribution to journalArticle

Chlorophyll
Fluorescence
Sensors
Temperature
Compensation and Redress
1 Citation (Scopus)

Automated multi-level governance compliance checking

King, T. C., De Vos, M., Dignum, V., Jonker, C. M., Li, T., Padget, J. & van Riemsdijk, M. B., 30 Nov 2017, In : Autonomous Agents and Multi-Agent Systems. 31, 6, p. 1283-1343 61 p.

Research output: Contribution to journalArticle

Open Access
File
Compliance
Concretes
Semantics
Acoustic waves
7 Citations (Scopus)

Bioequivalence methodologies for topical drug products: in vitro and ex vivo studies with a cortiscosteroid and an anti-fungal drug

Bastos Leal, L., Cordery, S. F., Delgado-Charro, M. B., Bunge, A. L. & Guy, R. H., Apr 2017, In : Pharmaceutical Research. 34, 4, p. 730-737 8 p.

Research output: Contribution to journalArticle

Open Access
10 Citations (Scopus)

Both maintenance and avoidance of RNA-binding protein interactions constrain coding region evolution

Savisaar, R. & Hurst, L., 1 May 2017, In : Molecular Biology and Evolution. 34, 5, p. 1110-1126

Research output: Contribution to journalArticle

Open Access
File
RNA-binding proteins
RNA-Binding Proteins
RNA
Maintenance
protein
1 Citation (Scopus)

Branching Brownian motion with absorption and the all-time minimum of branching Brownian motion with drift

Berestycki, J., Brunet, É., Harris, S. C. & Miłoś, P., 15 Sep 2017, In : Journal of Functional Analysis. 273, 6, p. 2107-2143 37 p.

Research output: Contribution to journalArticle

Open Access
File
Branching Brownian Motion
Brownian Motion with Drift
Absorption
Real Line
Traveling Wave

Characterizing tipping in a stochastic reduced stommel-type model in higher-dimensions

Budd, C., Glendinning, P., Hill, K. & Kuske, R., 2017, Extended Abstracts Spring 2016: Non Smooth Dynamics. Columbo, A., Jeffrey, M. R., Lazaro, J. T. & Olm, J. M. (eds.). Birkhauser, p. 25-29 5 p. (Trends in Mathematics; vol. 8).

Research output: Chapter in Book/Report/Conference proceedingChapter

Higher Dimensions
Climate Modeling
Model
Climate Models
Conceptual Model
8 Citations (Scopus)

Comparative analyses of selection operating on non-translated intergenic regions of diverse bacterial species

Thorpe, H. A., Bayliss, S. C., Hurst, L. D. & Feil, E. J., 5 May 2017, In : Genetics. 206, 1, p. 363-376 195784.

Research output: Contribution to journalArticle

Intergenic DNA
Genome
Staphylococcal Pneumonia
Bacterial Genomes
Untranslated RNA
2 Citations (Scopus)

Demographic noise slows down cycles of dominance

Yang, Q., Rogers, T. & Dawes, J. H. P., 7 Nov 2017, In : Journal of Theoretical Biology. 432, p. 157-168 12 p.

Research output: Contribution to journalArticle

Open Access
File
Mutation Rate
Noise
Mutation
demographic statistics
Demography
10 Citations (Scopus)

Dental data perform relatively poorly in reconstructing mammal phylogenies: Morphological partitions evaluated with molecular benchmarks

Sansom, R. S., Wills, M. A. & Williams, T., Sep 2017, In : Systematic Biology. 66, 5, p. 813-822 10 p.

Research output: Contribution to journalArticle

Open Access
File
Benchmarking
Phylogeny
Mammals
Tooth
teeth
2 Citations (Scopus)

Depletion of somatic mutations in splicing-associated sequences in cancer genomes

Hurst, L. & Batada, N. N., 7 Nov 2017, In : Genome Biology. 18, 1, 12 p., 213.

Research output: Contribution to journalArticle

Open Access
somatic mutation
mutation
cancer
genome
Genome
11 Citations (Scopus)

Designing and implementing transparency for real time inspection of autonomous robots

Theodorou, A., Wortham, R. H. & Bryson, J. J., 30 May 2017, In : Connection Science. 29, 3, p. 230-241 12 p.

Research output: Contribution to journalArticle

Open Access
File
Transparency
Inspection
Robots
Robotics
Intelligent agents

Diagnostics of circumstellar grains in geometric models – I. Structure and composition

Dawes, J. & Greaves, J. S., 11 May 2017, In : Monthly Notices of the Royal Astronomical Society. 467, 1, p. 218-225 8 p.

Research output: Contribution to journalArticle

Open Access
spectral energy distribution
dust
energy
wavelength
inclusions
3 Citations (Scopus)

Differences between hard and soft phylogenetic data

Sansom, R. S. & Wills, M. A., 20 Dec 2017, In : Proceedings of the Royal Society B: Biological Sciences. 284, 1869, 20172150.

Research output: Contribution to journalArticle

Open Access
Mammals
Bivalvia
Birds
Phylogeny
Fish
7 Citations (Scopus)
Open Access
File
Stochastic Dynamical Systems
Dimension Reduction
biology
dynamical systems
Biology
11 Citations (Scopus)

Direct determination of the mutation rate in the bumblebee reveals evidence for weak recombination-associated mutation and an approximate rate constancy in insects

Liu, H., Jia, Y., Sun, X., Tian, D., Hurst, L. D. & Yang, S., 1 Jan 2017, In : Molecular Biology and Evolution. 34, 1, p. 119-130 12 p.

Research output: Contribution to journalArticle

Open Access
constancy
Bombus
Mutation Rate
Genetic Recombination
recombination
4 Citations (Scopus)

Disturbed Placental Imprinting in Preeclampsia Leads to Altered Expression of DLX5, a Human-Specific Early Trophoblast Marker

Hurst, L., 7 Nov 2017, In : Circulation. 136, 19, p. 1824-1839 16 p.

Research output: Contribution to journalArticle

Open Access
Trophoblasts
Pre-Eclampsia
Placenta
Genes
Transcriptome

Do antibiotics and antibiotic resistance genes play a role in enhancing antimicrobial resistance in wastewater?

Castrignano, E., Feil, E., Lewis, S., Cartwright, N., Barden, R. & Kasprzyk-Hordern, B., 2017.

Research output: Contribution to conferencePoster

3 Citations (Scopus)

Draft genome sequences of Salinivibrio proteolyticus, Salinivibrio sharmensis, Salinivibrio siamensis, Salinivibrio costicola subsp. alcaliphilus, Salinivibrio costicola subsp. vallismortis, and 29 new isolates belonging to the genus Salinivibrio

López-Hermoso, C., de la Haba, R. R., Cristina Sánchez-Porro, S-P., Bayliss, S. C., Feil, E. J. & Ventosa, A., 1 Jul 2017, In : Genome announcements. 5, 27, e00244-17.

Research output: Contribution to journalArticle

Open Access
Genome
Base Composition
Open Reading Frames
Ecosystem
18 Citations (Scopus)

Dual-specificity phosphatase 5 controls the localized inhibition, propagation, and transforming potential of ERK signaling

Kidger, A. M., Rushworth, L. K., Stellzig, J., Davidson, J., Bryant, C. J., Bayley, C., Caddye, E., Rogers, T., Keyse, S. M. & Caunt, C. J., 17 Jan 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 3, p. E317-E326

Research output: Contribution to journalArticle

Open Access
Dual-Specificity Phosphatases
Extracellular Signal-Regulated MAP Kinases
Phosphotransferases
Cell Proliferation
Cell Aging
Open Access
File
2 Citations (Scopus)

Dynamics of the discrete Seno population model: Combined effects of harvest timing and intensity on population stability

Franco, D., Logemann, H., Perán, J. & Segura, J., 1 Aug 2017, In : Applied Mathematical Modelling. 48, p. 885-898 14 p.

Research output: Contribution to journalArticle

Harvesting
Population Model
Discrete Model
Timing
Schwarzian Derivative
1 Citation (Scopus)

Efficient parameter sensitivity computation for spatially extended reaction networks

Lester, C., Yates, C. & Baker, R. E., 28 Jan 2017, In : Journal of Chemical Physics. 146, 4, 044106.

Research output: Contribution to journalArticle

Open Access
File
Chemical reactions
sensitivity
chemical reactions
Stochastic models
Statistics

Eight great reasons to do mathematics

Budd, C., 2017, Recent Progress and Modern Challenges in Applied Mathematics, Modeling and Computational Science. . Melnik, R., Makarov, R. & Belair, J. (eds.). New York, U. S. A.: Springer New York, p. 245-262 18 p. (Fields Institute Communications; vol. 79).

Research output: Chapter in Book/Report/Conference proceedingChapter

Energy
Vary
Government
Heart
Review
9 Citations (Scopus)

Engineering of PEDF-Expressing Primary Pigment Epithelial Cells by the SB Transposon System Delivered by pFAR4 Plasmids

Thumann, G., Harmening, N., Prat-Souteyrand, C., Marie, C., Pastor, M., Sebe, A., Miskey, C., Hurst, L. D., Diarra, S., Kropp, M., Walter, P., Scherman, D., Ivics, Z., Izsvák, Z. & Johnen, S., 17 Mar 2017, In : Molecular Therapy - Nucleic Acids. 6, p. 302-314 13 p.

Research output: Contribution to journalArticle

Open Access
Plasmids
Epithelial Cells
Transgenes
Intravitreal Injections
Retinal Pigments
1 Citation (Scopus)

Enterobacteriaceae: joining the dots with pan-European epidemiology

Feil, E. J., 1 Feb 2017, In : The Lancet Infectious Diseases. 17, 2, p. 118-119 2 p.

Research output: Contribution to journalComment/debate

19 Citations (Scopus)

Estimating adult sex ratios in nature

Ancona, S., Dénes, F. V., Krüger, O., Székely, T. & Beissinger, S. R., 19 Sep 2017, In : Proceedings of the Royal Society B: Biological Sciences. 372, 1729, 20160313.

Research output: Contribution to journalReview article

Sex Ratio
sex ratio
Animals
Sex Characteristics
gender differences
6 Citations (Scopus)

Estimating the prevalence of functional exonic splice regulatory information

Savisaar, R. & Hurst, L. D., 1 Sep 2017, In : Human Molecular Genetics. 136, 9, p. 1059-1078 20 p.

Research output: Contribution to journalArticle

Open Access
Exons
Nucleotides
Sequence Analysis
Pressure
Mutation

Evidence for a rapid recovery of snakes following the Cretaceous-Paleogene mass extinction

Klein, C., Pisani, D., Field, D., Wills, M. & Longrich, N., 2017.

Research output: Contribution to conferenceAbstract

4 Citations (Scopus)

Extremely low Plasmodium prevalence in wild plovers and coursers from Cape Verde and Madagascar

Martínez-De La Puente, J., Eberhart-Phillips, L. J., Cristina Carmona-Isunza, M., Zefania, S., Navarro, M. J., Kruger, O., Hoffman, J. I., Székely, T. & Figuerola, J., 8 Jun 2017, In : Malaria Journal. 16, 1, 243.

Research output: Contribution to journalArticle

Open Access
Cape Verde
Madagascar
Plasmodium
Parasites
Parasitic Diseases
21 Citations (Scopus)

Faraday wave-droplet dynamics: discrete-time analysis

Durey, M. & Milewski, P., 25 Jun 2017, In : Journal of Fluid Mechanics. 821, p. 296-328 33 p.

Research output: Contribution to journalArticle

Open Access
baths
walking
fluids
circular orbits
interactions
16 Citations (Scopus)

Flow structure beneath rotational water waves with stagnation points

Ribeiro, R., Milewski, P. A. & Nachbin, A., 10 Feb 2017, In : Journal of Fluid Mechanics. 812, p. 792-814 23 p.

Research output: Contribution to journalArticle

Open Access
File
water waves
stagnation point
Water waves
Flow structure
Vorticity
14 Citations (Scopus)

Generalized additive models for gigadata: modelling the UK black smoke network daily data

Wood, S. N., Li, Z., Shaddick, G. & Augustin, N. H., 25 Apr 2017, In : Journal of the American Statistical Association. 112, 519, p. 1199-1210

Research output: Contribution to journalArticle

Open Access
Generalized Additive Models
Discretization
Modeling
Health
Sulfur Dioxide
1 Citation (Scopus)

Genetic isolation in an endemic African habitat specialist

dos Remedios, N., Küpper, C., Székely, T., Baker, N., Versfeld, W. & Lee, P. L. M., 1 Oct 2017, In : Ibis. 159, 4, p. 792-802 11 p.

Research output: Contribution to journalArticle

Open Access
genetic isolation
Eastern Africa
Southern Africa
habitat
Castanea
14 Citations (Scopus)

Genomic analysis of 495 vancomycin-resistant Enterococcus faecium reveals broad dissemination of a vanA plasmid in more than 19 clones from Copenhagen, Denmark

Pinholt, M., Gumpert, H., Bayliss, S., Nielsen, J. B., Vorobieva, V., Pedersen, M., Feil, E., Worning, P. & Westh, H., 1 Jan 2017, In : Journal of Antimicrobial Chemotherapy. 72, 1, p. 40-47 8 p.

Research output: Contribution to journalArticle

Enterococcus faecium
Denmark
Plasmids
Clone Cells
Molecular Epidemiology