Research Output 1977 2020

2013
29 Citations (Scopus)
85 Downloads (Pure)

Transmission of hypervirulence traits via sexual reproduction within and between lineages of the human fungal pathogen Cryptococcus gattii

Voelz, K., Ma, H., Phadke, S., Byrnes, E. J., Zhu, P., Mueller, O., Farrer, R. A., Henk, D. A., Lewit, Y., Hsueh, Y-P., Fisher, M. C., Idnurm, A., Heitman, J. & May, R. C., 5 Sep 2013, In : Plos Genetics. 9, 9, e1003771.

Research output: Contribution to journalArticle

Open Access
File
Cryptococcus gattii
sexual reproduction
virulence
Disease Outbreaks
Reproduction
3 Citations (Scopus)

Trophic structure, stability, and parasite persistence threshold in food webs

McQuaid, C. F. & Britton, N. F., Nov 2013, In : Bulletin of Mathematical Biology. 75, 11, p. 2196-207 12 p.

Research output: Contribution to journalArticle

Food Web
Food Chain
trophic structure
Persistence
food webs
20 Citations (Scopus)
89 Downloads (Pure)

Two-dimensional flexural-gravity waves of finite amplitude in deep water

Wang, Z., Vanden-Broeck, J-M. & Milewski, P. A., Aug 2013, In : IMA Journal of Applied Mathematics. 78, 4, p. 750-761 12 p.

Research output: Contribution to journalArticle

Open Access
File
Periodic Wave
Gravity Waves
Gravity waves
Elastic waves
Solitary Waves
14 Citations (Scopus)

Undecaprenyl pyrophosphate phosphatase confers low-level resistance to bacitracin in Enterococcus faecalis

Shaaly, A., Kalamorz, F., Gebhard, S. & Cook, G. M., 1 Jul 2013, In : Journal of Antimicrobial Chemotherapy. 68, 7, p. 1583-1593

Research output: Contribution to journalArticle

Bacitracin
Enterococcus faecalis
Glycine Agents
Cycloserine
Teicoplanin
21 Citations (Scopus)
71 Downloads (Pure)

Using false discovery rates to benchmark SNP-callers in next-generation sequencing projects

Farrer, R. A., Henk, D. A., MacLean, D., Studholme, D. J. & Fisher, M. C., 21 Mar 2013, In : Scientific Reports. 3, 1512.

Research output: Contribution to journalArticle

Open Access
File
Genes
8 Citations (Scopus)

Variational approximation and the use of collective coordinates

Dawes, J. H. P. & Susanto, H., 4 Jun 2013, In : Physical Review E. 87, 6, 063202.

Research output: Contribution to journalArticle

Variational Approximation
projection
Projection
approximation
partial differential equations
4 Citations (Scopus)
70 Downloads (Pure)

Voter models with conserved dynamics

Caccioli, F., Dall'Asta, L., Galla, T. & Rogers, T., 10 May 2013, In : Physical Review E. 87, 5, 10 p., 052114.

Research output: Contribution to journalArticle

Open Access
File
Voter Model
Scaling
Domain Growth
scaling
Odds
17 Citations (Scopus)

Why care? Inferring the evolution of complex social behaviour

Székely, T., Remeš, V., Freckleton, R. P. & Liker, A., Jul 2013, In : Journal of Evolutionary Biology. 26, 7, p. 1381-1391 11 p.

Research output: Contribution to journalArticle

parental care
social behavior
incubation
phylogenetics
social environment
1 Citation (Scopus)

Why do males care for their competitor's offspring?

Székely, T., Hoffman, J. I. & Krüger, O., Dec 2013, In : Animal Behaviour. 86, 6, p. e1-e2 2 p.

Research output: Contribution to journalArticle

2012
50 Citations (Scopus)

ABC transporters of antimicrobial peptides in Firmicutes bacteria - phylogeny, function and regulation

Gebhard, S., 1 Dec 2012, In : Molecular Microbiology. 86, 6, p. 1295-1317

Research output: Contribution to journalArticle

14 Citations (Scopus)

A fast method for binary programming using first-order derivatives, with application to topology optimization with buckling constraints

Browne, P. A., Budd, C., Gould, N. I. M., Kim, H. A. & Scott, J. A., 21 Dec 2012, In : International Journal for Numerical Methods in Engineering. 92, 12, p. 1026-1043 18 p.

Research output: Contribution to journalArticle

Topology Optimization
Shape optimization
Buckling
Programming
Binary
52 Citations (Scopus)

A horizon scanning assessment of current and potential future threats to migratory shorebirds

Sutherland, W. J., Amano, T., Alves, J. A., Gill, J. A., Chang, C. H., Davidson, N. C., Max Finlayson, C., Gill, R. E., González, P. M., Gunnarsson, T. G., Kleijn, D., Spray, C. J., Székely, T. & Thompson, D. B. A., 2012, In : Ibis. 154, 4, p. 663-679

Research output: Contribution to journalArticle

wader
A horizons
wetlands
volcanoes
recreation
8 Citations (Scopus)
74 Downloads (Pure)

Annotating answer-set programs in Lana

De Vos, M., Kisa, D. G., Oetsch, J., Puehrer, J. & Tompits, H., Jul 2012, In : Theory and Practice of Logic Programming. 12, 4-5, p. 616-637 18 p.

Research output: Contribution to journalArticle

File
Answer Sets
Answer Set Programming
HTML
Set theory
Annotation
18 Citations (Scopus)

A novel transgenic line using the Cre-lox system to allow permanent lineage-labeling of the zebrafish neural crest

Rodrigues, F. S. L. M., Doughton, G., Yang, B. & Kelsh, R. N., 2012, In : Genesis. 50, 10, p. 750-757

Research output: Contribution to journalArticle

Neural Crest
Zebrafish
Oligodendroglia
Ear
Stem Cells

An overview of the spider fauna of Maio (Cape Verde Islands), with some additional recent records (Arachnida, Araneae)

Breitling, R., Coleing, A., Peixoto, T., Nagle, H., Hancock, E. G., Kelsh, R. N. & Szekely, T., 2012, In : Zoologia Caboverdiana. 2, 2, p. 43-52

Research output: Contribution to journalArticle

Cape Verde
Arachnida
Araneae
fauna
Dictynidae
7 Citations (Scopus)

A role for consciousness in action selection

Bryson, J. J., Dec 2012, In : International Journal of Machine Consciousness. 4, 2, p. 471-482 12 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)
73 Downloads (Pure)

A scaling limit theorem for the parabolic Anderson model with exponential potential

Lacoin, H. & Morters, P., 2012, Probability in complex physical systems: In honour of Jürgen Gärtner and Erwin Bolthausen. Deuschel, J. D., Gentz, B., Konig, W., Von Reesse, M., Scheutzow, M. & Schmock, U. (eds.). Berlin: Springer, Vol. 11. p. 247-272 (Springer Proceedings in Mathematics; vol. 11).

Research output: Chapter in Book/Report/Conference proceedingChapter

Open Access
File
Anderson Model
Scaling Limit
Limit Theorems
Almost Sure Limit Theorem
Random Potential
8 Citations (Scopus)
61 Downloads (Pure)

A simple, highly visual in vivo screen for anaplastic lymphoma kinase inhibitors

Rodrigues, F. S. L. M., Yang, X., Nikaido, M., Liu, Q. & Kelsh, R. N., 21 Dec 2012, In : ACS Chemical Biology. 7, 12, p. 1968-1974 7 p.

Research output: Contribution to journalArticle

Open Access
File
Assays
Zebrafish
anaplastic lymphoma kinase
Automation
Neuroblastoma
9 Citations (Scopus)
95 Downloads (Pure)

Assessment of iontophoretic and passive ungual penetration by laser scanning confocal microscopy

Dutet, J. & Delgado-Charro, M. B., Dec 2012, In : Pharmaceutical Research. 29, 12, p. 3464-3474

Research output: Contribution to journalArticle

Open Access
File
Nails
Confocal microscopy
Confocal Microscopy
Scanning
Lasers
1 Citation (Scopus)
81 Downloads (Pure)

Branching Brownian motion: Almost sure growth along scaled paths

Harris, S. C. & Roberts, M. I., 2012, In : Séminaire de Probabilités. XLIV, p. 375-399

Research output: Contribution to journalArticle

Open Access
File
Branching Brownian Motion
Path
Spine
Large Deviations
30 Citations (Scopus)

Clonality despite sex: the evolution of host-associated sexual neighborhoods in the pathogenic fungus penicillium marneffei

Henk, D. A., Shahar-Golan, R., Devi, K. R., Boyce, K. J., Zhan, N., Fedorova, N. D., Nierman, W. C., Hsueh, P. R., Yuen, K. Y., Sieu, T. P. M., Van Kinh, N., Wertheim, H., Baker, S. G., Day, J. N., Vanittanakom, N., Bignell, E. M., Andrianopoulos, A. & Fisher, M. C., 4 Oct 2012, In : PLoS Pathogens. 8, 10, e1002851.

Research output: Contribution to journalArticle

Penicillium
Fungi
Genetic Recombination
Population
Vietnam
18 Citations (Scopus)

Competition between transposable elements and mutator genes in bacteria

Feher, T., Bogos, B., Mehi, O., Fekete, G., Csorgo, B., Kovacs, K., Posfai, G., Papp, B., Hurst, L. D. & Pal, C., 1 Oct 2012, In : Molecular Biology and Evolution. 29, 10, p. 3153-3159

Research output: Contribution to journalArticle

DNA Transposable Elements
Mutation Rate
transposons
mutation
Bacteria

Computational music theory

Boenn, G., Brain, M., De Vos, M. & Ffitch, J., 2012, Musical Metacreation: Papers from the 2012 AIIDE Workshop. Association for the Advancement of Artificial Intelligence (AAAI), p. 27-34 8 p. (AAAI Technical Report; vol. WS-12-16).

Research output: Chapter in Book/Report/Conference proceedingChapter

Semantics
Chemical analysis
31 Citations (Scopus)

Correlations between the levels of Oct4 and nanog as a signature for naïve pluripotency in mouse embryonic stem cells

Munoz-Descalzo, S., Rue, P., Garcia-Ojalvo, J. & Martinez Arias, A., Dec 2012, In : Stem Cells. 30, 12, p. 2683-2691 9 p.

Research output: Contribution to journalArticle

24 Citations (Scopus)

Demographic noise can lead to the spontaneous formation of species

Rogers, T., McKane, A. J. & Rossberg, A. G., 2012, In : EPL (Europhysics Letters). 97, 4, 40008.

Research output: Contribution to journalArticle

organisms
fitness
resources
curves
11 Citations (Scopus)

Detecting maternal-effect loci by statistical cross-fostering

Wolf, J. & Cheverud, J. M., 2012, In : Genetics. 191, 1, p. 261-277 17 p.

Research output: Contribution to journalArticle

Foster Home Care
Genotype
Mothers
Phenotype
Genetic Loci

Development and evaluation of age appropriate pellet formulations for an antiepileptic drug

Cabana Montenegro, S., Delgado-Charro, M. B. & Fotaki, N., 2012.

Research output: Contribution to conferencePaper

62 Citations (Scopus)

Direct and indirect consequences of meiotic recombination: Implications for genome evolution

Webster, M. T. & Hurst, L. D., Mar 2012, In : Trends in Genetics. 28, 3, p. 101-109 9 p.

Research output: Contribution to journalArticle

Genetic Recombination
Genome
Gene Conversion
Mutation
Alleles
12 Citations (Scopus)

Directional biases and resource-dependence in dispersal generate spatial patterning in a consumer-producer model

Anderson, K. E., Hilker, F. M. & Nisbet, R. M., Mar 2012, In : Ecology Letters. 15, 3, p. 209-217 9 p.

Research output: Contribution to journalArticle

resource
macroinvertebrates
coasts
vegetation
rivers
17 Citations (Scopus)
86 Downloads (Pure)

Dynamics of gravity-capillary solitary waves in deep water

Wang, Z. & Milewski, P. A., Oct 2012, In : Journal of Fluid Mechanics. 708, p. 480-501

Research output: Contribution to journalArticle

Open Access
File
deep water
Solitons
Gravitation
solitary waves
gravitation
1138 Citations (Scopus)

Emerging fungal threats to animal, plant and ecosystem health

Fisher, M. C., Henk, D. A., Briggs, C. J., Brownstein, J. S., Madoff, L. C., McCraw, S. L. & Gurr, S. J., 2012, In : Nature. 484, 7393, p. 186-194 9 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)
112 Downloads (Pure)

EuFishBioMed (COST Action BM0804): a European network to promote the use of small fishes in biomedical research

Strähle, U., Bally-Cuif, L., Kelsh, R., Beis, D., Mione, M., Panula, P., Figueras, A., Gothilf, Y., Brösamle, C., Geisler, R. & Knedlitschek, G., 2012, In : Zebrafish. 9, 2, p. 90-93

Research output: Contribution to journalArticle

Open Access
File
3 Citations (Scopus)

Forest health monitoring

Augustin, N., 2012, Encyclopedia of Environmetrics . 2nd ed. Chichester, UK: W J Wiley & Sons, p. 1090-1092 3 p.

Research output: Chapter in Book/Report/Conference proceedingEntry for encyclopedia/dictionary

38 Citations (Scopus)

From genotype to phenotype: can systems biology be used to predict Staphylococcus aureus virulence?

Priest, N. K., Rudkin, J. K., Feil, E. J., Van Den Elsen, J. M. H., Cheung, A., Peacock, S. J., Laabei, M., Lucks, D. A., Recker, M. & Massey, R. C., Nov 2012, In : Nature Reviews Microbiology. 10, 11, p. 791-797 7 p.

Research output: Contribution to journalReview article

Systems Biology
Virulence
Staphylococcus aureus
Genotype
Phenotype
64 Downloads (Pure)

From the imaginary to the real: The back and forth between reality and simulation

Whitehouse, H., Kahn, K., Hochberg, M. E. & Bryson, J. J., 1 Oct 2012, In : Religion, Brain & Behavior. 2, 3, p. 219-224

Research output: Contribution to journalArticle

Open Access
File
31 Citations (Scopus)
97 Downloads (Pure)

Ganoderma boninense basidiospores in oil palm plantations: evaluation of their possible role in stem rots of Elaeis guineensis

Rees, R. W., Flood, J., Hasan, Y., Wills, M. A. & Cooper, R. M., Jun 2012, In : Plant Pathology. 61, 3, p. 567-578 12 p.

Research output: Contribution to journalArticle

Open Access
File
Ganoderma
stem rot
basidiospores
Elaeis guineensis
Oils
2 Citations (Scopus)
89 Downloads (Pure)

Genotype-dependent responses to levels of sibling competition over maternal resources in mice

Hager, R., Cheverud, J. M. & Wolf, J. B., 2012, In : Heredity. 108, 5, p. 515-520 6 p.

Research output: Contribution to journalArticle

Open Access
File
Litter Size
Siblings
Genotype
Mothers
Social Environment
6 Citations (Scopus)
138 Downloads (Pure)
Open Access
File
50 Citations (Scopus)
66 Downloads (Pure)

Great majority of recombination events in Arabidopsis are gene conversion events

Yang, S., Yuan, Y., Wang, L., Li, J., Wang, W., Liu, H., Chen, J., Hurst, L. D. & Tian, D., 18 Dec 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 51, p. 20992-20997 6 p.

Research output: Contribution to journalArticle

Open Access
File
gene conversion
Arabidopsis
crossing over
centromeres
meiosis

Handling change in normative specifications

Athakravi, D., Corapi, D., Russo, A., De Vos, M., Padget, J. A. & Satoh, K., 2012, International Conference on Autonomous Agents and Multiagent Systems, AAMAS 2012, Valencia, Spain, June 4-8, 2012 (3 Volumes). Hoek, W. V. D., Padgham, L., Conitzer, V. & Winikoff, M. (eds.). The International Foundation for Autonomous Agents and Multiagent Systems, p. 1369-1370 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)

How to compare usability of techniques for the specification of virtual agents' behavior? An experimental pilot study with human subjects

Gemrot, J., Brom, C., Bída, M. & Bryson, J., 2012, Agents for Educational Games and Simulations International Workshop, AEGS 2011, Taipei, Taiwan, May 2, 2011. Revised Papers. Berlin: Springer, Vol. 7471 LNAI. p. 38-62 25 p. (Lecture Notes in Computer Science).

Research output: Chapter in Book/Report/Conference proceedingOther chapter contribution

Students
Specifications
Planning
Intelligent agents
Computer programming
4 Citations (Scopus)
72 Downloads (Pure)

Human behaviour: Sex ratio and the city

Székely, Á. & Székely, T., 1 Sep 2012, In : Current Biology. 22, 17, p. R684-R685

Research output: Contribution to journalArticle

Open Access
File
economic behavior
Sex Ratio
human behavior
demography
sex ratio

Improving the Forecasting of Storms

Budd, C., 2012

Research output: Non-textual formWeb publication/site

mesh size
science
23 Citations (Scopus)
83 Downloads (Pure)

Individual variation and the resolution of conflict over parental care in penduline tits

Van Dijk, R. E., Szekely, T., Komdeur, J., Pogány, A., Fawcett, T. W. & Weissing, F. J., 2012, In : Proceedings of the Royal Society B: Biological Sciences. 279, 1735, p. 1927-1936 10 p.

Research output: Contribution to journalArticle

Open Access
File
conflict management
parental care
Negotiating
individual variation
evolutionarily stable strategy
2 Citations (Scopus)
80 Downloads (Pure)
Open Access
File
Global Warming
Saudi Arabia
spatial data
Islands
Oceans and Seas
66 Citations (Scopus)
191 Downloads (Pure)
Open Access
File
Systemic risk
Lending
Network model
Bank failure
Banking system
2 Citations (Scopus)

Internet memory and life after death

Bryson, J. J., 1 Jul 2012, In : Bereavement Care. 31, 2, p. 70-72 3 p.

Research output: Contribution to journalArticle

Internet
death
memorial
Intelligence
Human Body
26 Citations (Scopus)

Iontophoretic drug delivery across the nail

Delgado-Charro, M. B., Jan 2012, In : Expert Opinion on Drug Delivery. 9, 1, p. 91-103 13 p.

Research output: Contribution to journalReview article

Nails
Iontophoresis
Pharmaceutical Preparations
Onychomycosis
terbinafine
7 Citations (Scopus)

Jamming and pattern formation in models of segregation

Rogers, T. & McKane, A. J., 2012, In : Physical Review E. 85, 4, 5 p., 041136.

Research output: Contribution to journalArticle

jamming
Jamming
Segregation
Pattern Formation
Nonequilibrium Systems
20 Citations (Scopus)

Late-replicating domains have higher divergence and diversity in Drosophila melanogaster

Weber, C. C., Pink, C. J. & Hurst, L. D., Feb 2012, In : Molecular Biology and Evolution. 29, 2, p. 873-882 10 p.

Research output: Contribution to journalArticle

Mutation Rate
Drosophila melanogaster
divergence
Eukaryota
mutation