Research Output 1977 2019

2013
7 Citations (Scopus)

Species-specific PCR to describe local-scale distributions of four cryptic species in the Penicillium chrysogenum complex

Browne, A. GP., Fisher, M. C. & Henk, D. A., Oct 2013, In : Fungal Ecology. 6, 5, p. 419-429 11 p.

Research output: Contribution to journalArticle

Penicillium chrysogenum
Penicillium
fungus
fungi
rail transportation

Spotting a role for an Ig superfamily cell adhesion molecule in pigment pattern formation

Kelsh, R. N., Mar 2013, In : Pigment Cell & Melanoma Research. 26, 2, p. 161-162 2 p.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Stabilization of population dynamics via threshold harvesting strategies

Franco, D. & Perán, J., Jun 2013, In : Ecological Complexity. 14, p. 85-94 10 p.

Research output: Contribution to journalArticle

Open Access
File
population dynamics
stabilization
thinning
carrying capacity
population size
22 Citations (Scopus)
Open Access
File
Sampled-data Systems
Infinite-dimensional Systems
Nonlinear Control
Control Theory
Stabilization
9 Citations (Scopus)

Steady dark solitary flexural gravity waves

Milewski, P. A., Vanden-Broeck, J-M. & Wang, Z., Feb 2013, In : Proceedings of the Royal Society A. 469, 2150, 20120485.

Research output: Contribution to journalArticle

Open Access
File
gravity waves
solitary waves
nonlinear equations
asymptotes
water waves
17 Citations (Scopus)

Stochastic dynamics on slow manifolds

Constable, G. W. A., McKane, A. J. & Rogers, T., 26 Jul 2013, In : Journal of Physics A: Mathematical and Theoretical. 46, 29, 295002.

Research output: Contribution to journalArticle

Open Access
File
Slow Manifold
Stochastic Dynamics
dynamical systems
Dynamical systems
epidemiology

Sugar concentration influences decision making in Apis mellifera L. workers during early-stage honey storage behaviour

Greco, M. K., Lang, J., Gallmann, P., Priest, N., Feil, E. & Crailsheim, K., 2013, In : Open Journal of Animal Sciences. 3, 3, p. 210-218

Research output: Contribution to journalArticle

Open Access
File
Apis mellifera
honey
decision making
sugars
worker honey bees
62 Citations (Scopus)

The Bacillus BioBrick Box: Generation and evaluation of essential genetic building blocks for standardized work with Bacillus subtilis

Radeck, J., Kraft, K., Bartels, J., Cikovic, T., Dürr, F., Emenegger, J., Kelterborn, S., Sauer, C., Fritz, G., Gebhard, S. & Mascher, T., 1 Jan 2013, In : Journal of Biological Engineering. 7, 1, p. 29

Research output: Contribution to journalArticle

Open Access
File
Bacilli
Bacillus subtilis
Bacillus
Epitopes
Proteins
69 Citations (Scopus)

The evolution of sex roles in birds is related to adult sex ratio

Liker, A., Freckleton, R. P. & Székely, T., 12 Mar 2013, In : Nature Communications. 4, 1587.

Research output: Contribution to journalArticle

Open Access
File
birds
Sex Ratio
Birds
Social Environment
Breeding
28 Citations (Scopus)

The form of a trade-off determines the response to competition

Maharjan, R., Nilsson, S., Sung, J., Haynes, K., Beardmore, R. E., Hurst, L. D., Ferenci, T. & Gudelj, I., Oct 2013, In : Ecology Letters. 16, 10, p. 1267-1276 10 p.

Research output: Contribution to journalArticle

trade-off
ecology
chemostat
resource allocation
engineers

The immune system in pigment cell biology: Villain or hero?

Kelsh, R., Arnheiter, H. & Bosenberg, M., 1 Jul 2013, In : Pigment Cell and Melanoma Research. 26, 4, p. 433 1 p.

Research output: Contribution to journalEditorial

3 Citations (Scopus)

The impact of introduced predators on an island endemic, the St Helena Plover, Charadrius sanctaehelenae

Burns, F., McCulloch, N., Székely, T. & Bolton, M., Jun 2013, In : Bird Conservation International. 23, 2, p. 125-135 11 p.

Research output: Contribution to journalArticle

Open Access
File
Saint Helena
Charadrius
predator
predators
cats
6 Citations (Scopus)

The origin of power-law emergent scaling in large binary networks

Almond, D. P., Budd, C. J., Freitag, M. A., Hunt, G. W., McCullen, N. J. & Smith, N. D., 15 Feb 2013, In : Physica A: Statistical Mechanics and its Applications. 392, 4, p. 1004-1027

Research output: Contribution to journalArticle

Open Access
File
Conduction
scaling laws
Power Law
Proportion
Scaling
16 Citations (Scopus)

The parental investment models of Maynard Smith: a retrospective and prospective view

Houston, A. I., Székely, T. & McNamara, J. M., Oct 2013, In : Animal Behaviour. 86, 4, p. 667-674 8 p.

Research output: Contribution to journalArticle

parental investment
parental care
mating behavior
parental behavior
game theory
19 Citations (Scopus)

The plover neurotranscriptome assembly: transcriptomic analysis in an ecological model species without a reference genome

Moghadam, H. K., Harrison, P. W., Zachar, G., Székely, T. & Mank, J. E., Jul 2013, In : Molecular Ecology Resources. 13, 4, p. 696-705

Research output: Contribution to journalArticle

transcriptomics
Charadrius alexandrinus
genome
Genome
Transcriptome
33 Citations (Scopus)
ciclopirox
Lacquer
Poloxamer
Triamcinolone Acetonide
Hydrogels
2 Citations (Scopus)

The test of time

Bosenberg, M., Arnheiter, H. & Kelsh, R., 1 Mar 2013, In : Pigment Cell and Melanoma Research. 26, 2, p. 157 1 p.

Research output: Contribution to journalEditorial

398 Citations (Scopus)

Threats to an ecosystem service: Pressures on pollinators

Vanbergen, A. J., Baude, M., Biesmeijer, J. C., Britton, N. F., Brown, M. J. F., Bryden, J., Budge, G. E., Bull, J. C., Carvell, C., Challinor, A. J., Connolly, C. N., Evans, D. J., Feil, E. J., Garratt, M. P., Greco, M. K., Heard, M. S., Jansen, V. A. A., Keeling, M. J., Kunin, W. E., Marris, G. C. & 19 othersMemmott, J., Murray, J. T., Nicolson, S. W., Osborne, J. L., Paxton, R. J., Pirk, C. W. W., Polce, C., Potts, S. G., Priest, N. K., Raine, N. E., Roberts, S., Ryabov, E. V., Shafir, S., Shirley, M. D. F., Simpson, S. J., Stevenson, P. C., Stone, G. N., Termansen, M. & Wright, G. A., Jun 2013, In : Frontiers in Ecology and the Environment. 11, 5, p. 251-259 9 p.

Research output: Contribution to journalArticle

Open Access
File
pollinating insects
pollinator
ecosystem service
pollinators
ecosystem services
20 Citations (Scopus)

Three dimensional flexural–gravity waves

Milewski, P. A. & Wang, Z., Aug 2013, In : Studies in Applied Mathematics. 131, 2, p. 135-148 14 p.

Research output: Contribution to journalArticle

Open Access
File
Gravity Waves
Gravity waves
Elastic waves
Solitons
Wave packets

Towards a quantitative model of the gene regulatory network underlying melanocyte development.

Kelsh, R., May 2013, (Unpublished).

Research output: Contribution to conferencePoster

5 Citations (Scopus)

Transdermal flux predictions for selected selective oestrogen receptor modulators (SERMs): Comparison with experimental results

Güngör, S., Delgado-Charro, M. B., Masini-Etévé, V., Potts, R. O. & Guy, R. H., 28 Dec 2013, In : Journal of Controlled Release. 172, 3, p. 601-606 6 p.

Research output: Contribution to journalArticle

Open Access
File
Selective Estrogen Receptor Modulators
Skin
Danazol
Water
Epidermis
28 Citations (Scopus)

Transmission of hypervirulence traits via sexual reproduction within and between lineages of the human fungal pathogen Cryptococcus gattii

Voelz, K., Ma, H., Phadke, S., Byrnes, E. J., Zhu, P., Mueller, O., Farrer, R. A., Henk, D. A., Lewit, Y., Hsueh, Y-P., Fisher, M. C., Idnurm, A., Heitman, J. & May, R. C., 5 Sep 2013, In : Plos Genetics. 9, 9, e1003771.

Research output: Contribution to journalArticle

Open Access
File
Cryptococcus gattii
sexual reproduction
virulence
Disease Outbreaks
Reproduction
3 Citations (Scopus)

Trophic structure, stability, and parasite persistence threshold in food webs

McQuaid, C. F. & Britton, N. F., Nov 2013, In : Bulletin of Mathematical Biology. 75, 11, p. 2196-207 12 p.

Research output: Contribution to journalArticle

Food Web
Food Chain
trophic structure
Persistence
food webs
20 Citations (Scopus)

Two-dimensional flexural-gravity waves of finite amplitude in deep water

Wang, Z., Vanden-Broeck, J-M. & Milewski, P. A., Aug 2013, In : IMA Journal of Applied Mathematics. 78, 4, p. 750-761 12 p.

Research output: Contribution to journalArticle

Open Access
File
Periodic Wave
Gravity Waves
Gravity waves
Elastic waves
Solitary Waves
12 Citations (Scopus)

Undecaprenyl pyrophosphate phosphatase confers low-level resistance to bacitracin in Enterococcus faecalis

Shaaly, A., Kalamorz, F., Gebhard, S. & Cook, G. M., 1 Jul 2013, In : Journal of Antimicrobial Chemotherapy. 68, 7, p. 1583-1593

Research output: Contribution to journalArticle

Bacitracin
Enterococcus faecalis
Glycine Agents
Cycloserine
Teicoplanin
21 Citations (Scopus)

Using false discovery rates to benchmark SNP-callers in next-generation sequencing projects

Farrer, R. A., Henk, D. A., MacLean, D., Studholme, D. J. & Fisher, M. C., 21 Mar 2013, In : Scientific Reports. 3, 1512.

Research output: Contribution to journalArticle

Open Access
File
Genes
7 Citations (Scopus)

Variational approximation and the use of collective coordinates

Dawes, J. H. P. & Susanto, H., 4 Jun 2013, In : Physical Review E. 87, 6, 063202.

Research output: Contribution to journalArticle

Variational Approximation
projection
Projection
approximation
partial differential equations
4 Citations (Scopus)

Voter models with conserved dynamics

Caccioli, F., Dall'Asta, L., Galla, T. & Rogers, T., 10 May 2013, In : Physical Review E. 87, 5, 10 p., 052114.

Research output: Contribution to journalArticle

Open Access
File
Voter Model
Scaling
Domain Growth
scaling
Odds
17 Citations (Scopus)

Why care? Inferring the evolution of complex social behaviour

Székely, T., Remeš, V., Freckleton, R. P. & Liker, A., Jul 2013, In : Journal of Evolutionary Biology. 26, 7, p. 1381-1391 11 p.

Research output: Contribution to journalArticle

parental care
social behavior
incubation
phylogenetics
social environment
1 Citation (Scopus)

Why do males care for their competitor's offspring?

Székely, T., Hoffman, J. I. & Krüger, O., Dec 2013, In : Animal Behaviour. 86, 6, p. e1-e2 2 p.

Research output: Contribution to journalArticle

2012
46 Citations (Scopus)

ABC transporters of antimicrobial peptides in Firmicutes bacteria - phylogeny, function and regulation

Gebhard, S., 1 Dec 2012, In : Molecular Microbiology. 86, 6, p. 1295-1317

Research output: Contribution to journalArticle

14 Citations (Scopus)

A fast method for binary programming using first-order derivatives, with application to topology optimization with buckling constraints

Browne, P. A., Budd, C., Gould, N. I. M., Kim, H. A. & Scott, J. A., 21 Dec 2012, In : International Journal for Numerical Methods in Engineering. 92, 12, p. 1026-1043 18 p.

Research output: Contribution to journalArticle

Topology Optimization
Shape optimization
Buckling
Programming
Binary
49 Citations (Scopus)

A horizon scanning assessment of current and potential future threats to migratory shorebirds

Sutherland, W. J., Amano, T., Alves, J. A., Gill, J. A., Chang, C. H., Davidson, N. C., Max Finlayson, C., Gill, R. E., González, P. M., Gunnarsson, T. G., Kleijn, D., Spray, C. J., Székely, T. & Thompson, D. B. A., 2012, In : Ibis. 154, 4, p. 663-679

Research output: Contribution to journalArticle

wader
A horizons
wetlands
volcanoes
recreation
8 Citations (Scopus)

Annotating answer-set programs in Lana

De Vos, M., Kisa, D. G., Oetsch, J., Puehrer, J. & Tompits, H., Jul 2012, In : Theory and Practice of Logic Programming. 12, 4-5, p. 616-637 18 p.

Research output: Contribution to journalArticle

File
Answer Sets
Answer Set Programming
HTML
Set theory
Annotation
18 Citations (Scopus)

A novel transgenic line using the Cre-lox system to allow permanent lineage-labeling of the zebrafish neural crest

Rodrigues, F. S. L. M., Doughton, G., Yang, B. & Kelsh, R. N., 2012, In : Genesis. 50, 10, p. 750-757

Research output: Contribution to journalArticle

Neural Crest
Zebrafish
Oligodendroglia
Ear
Stem Cells

An overview of the spider fauna of Maio (Cape Verde Islands), with some additional recent records (Arachnida, Araneae)

Breitling, R., Coleing, A., Peixoto, T., Nagle, H., Hancock, E. G., Kelsh, R. N. & Szekely, T., 2012, In : Zoologia Caboverdiana. 2, 2, p. 43-52

Research output: Contribution to journalArticle

Cape Verde
Arachnida
Araneae
fauna
Dictynidae
7 Citations (Scopus)

A role for consciousness in action selection

Bryson, J. J., Dec 2012, In : International Journal of Machine Consciousness. 4, 2, p. 471-482 12 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

A scaling limit theorem for the parabolic Anderson model with exponential potential

Lacoin, H. & Morters, P., 2012, Probability in complex physical systems: In honour of Jürgen Gärtner and Erwin Bolthausen. Deuschel, J. D., Gentz, B., Konig, W., Von Reesse, M., Scheutzow, M. & Schmock, U. (eds.). Berlin: Springer, Vol. 11. p. 247-272 (Springer Proceedings in Mathematics; vol. 11).

Research output: Chapter in Book/Report/Conference proceedingChapter

Open Access
File
Anderson Model
Scaling Limit
Limit Theorems
Almost Sure Limit Theorem
Random Potential
7 Citations (Scopus)

A simple, highly visual in vivo screen for anaplastic lymphoma kinase inhibitors

Rodrigues, F. S. L. M., Yang, X., Nikaido, M., Liu, Q. & Kelsh, R. N., 21 Dec 2012, In : ACS Chemical Biology. 7, 12, p. 1968-1974 7 p.

Research output: Contribution to journalArticle

Open Access
File
Assays
Zebrafish
anaplastic lymphoma kinase
Automation
Neuroblastoma
9 Citations (Scopus)

Assessment of iontophoretic and passive ungual penetration by laser scanning confocal microscopy

Dutet, J. & Delgado-Charro, M. B., Dec 2012, In : Pharmaceutical Research. 29, 12, p. 3464-3474

Research output: Contribution to journalArticle

Open Access
File
Nails
Confocal microscopy
Confocal Microscopy
Scanning
Lasers
1 Citation (Scopus)

Branching Brownian motion: Almost sure growth along scaled paths

Harris, S. C. & Roberts, M. I., 2012, In : Séminaire de Probabilités. XLIV, p. 375-399

Research output: Contribution to journalArticle

Open Access
File
Branching Brownian Motion
Path
Spine
Large Deviations
28 Citations (Scopus)

Clonality despite sex: the evolution of host-associated sexual neighborhoods in the pathogenic fungus penicillium marneffei

Henk, D. A., Shahar-Golan, R., Devi, K. R., Boyce, K. J., Zhan, N., Fedorova, N. D., Nierman, W. C., Hsueh, P. R., Yuen, K. Y., Sieu, T. P. M., Van Kinh, N., Wertheim, H., Baker, S. G., Day, J. N., Vanittanakom, N., Bignell, E. M., Andrianopoulos, A. & Fisher, M. C., 4 Oct 2012, In : PLoS Pathogens. 8, 10, e1002851.

Research output: Contribution to journalArticle

Penicillium
Fungi
Genetic Recombination
Population
Vietnam
16 Citations (Scopus)

Competition between transposable elements and mutator genes in bacteria

Feher, T., Bogos, B., Mehi, O., Fekete, G., Csorgo, B., Kovacs, K., Posfai, G., Papp, B., Hurst, L. D. & Pal, C., 1 Oct 2012, In : Molecular Biology and Evolution. 29, 10, p. 3153-3159

Research output: Contribution to journalArticle

DNA Transposable Elements
Mutation Rate
transposons
mutation
Bacteria

Computational music theory

Boenn, G., Brain, M., De Vos, M. & Ffitch, J., 2012, Musical Metacreation: Papers from the 2012 AIIDE Workshop. Association for the Advancement of Artificial Intelligence (AAAI), p. 27-34 8 p. (AAAI Technical Report; vol. WS-12-16).

Research output: Chapter in Book/Report/Conference proceedingChapter

Semantics
Chemical analysis
30 Citations (Scopus)

Correlations between the levels of Oct4 and nanog as a signature for naïve pluripotency in mouse embryonic stem cells

Munoz-Descalzo, S., Rue, P., Garcia-Ojalvo, J. & Martinez Arias, A., Dec 2012, In : Stem Cells. 30, 12, p. 2683-2691 9 p.

Research output: Contribution to journalArticle

23 Citations (Scopus)

Demographic noise can lead to the spontaneous formation of species

Rogers, T., McKane, A. J. & Rossberg, A. G., 2012, In : EPL (Europhysics Letters). 97, 4, 40008.

Research output: Contribution to journalArticle

organisms
fitness
resources
curves
11 Citations (Scopus)

Detecting maternal-effect loci by statistical cross-fostering

Wolf, J. & Cheverud, J. M., 2012, In : Genetics. 191, 1, p. 261-277 17 p.

Research output: Contribution to journalArticle

Foster Home Care
Genotype
Mothers
Phenotype
Genetic Loci

Development and evaluation of age appropriate pellet formulations for an antiepileptic drug

Cabana Montenegro, S., Delgado-Charro, M. B. & Fotaki, N., 2012.

Research output: Contribution to conferencePaper

60 Citations (Scopus)

Direct and indirect consequences of meiotic recombination: Implications for genome evolution

Webster, M. T. & Hurst, L. D., Mar 2012, In : Trends in Genetics. 28, 3, p. 101-109 9 p.

Research output: Contribution to journalArticle

Genetic Recombination
Genome
Gene Conversion
Mutation
Alleles
12 Citations (Scopus)

Directional biases and resource-dependence in dispersal generate spatial patterning in a consumer-producer model

Anderson, K. E., Hilker, F. M. & Nisbet, R. M., Mar 2012, In : Ecology Letters. 15, 3, p. 209-217 9 p.

Research output: Contribution to journalArticle

resource
macroinvertebrates
coasts
vegetation
rivers