Research Output

2016

Clarification of mural cell coverage of vascular endothelial cells by live imaging of zebrafish

Ando, K., Fukuhara, S., Izumi, N., Nakajima, H., Fukui, H., Kelsh, R. N. & Mochizuki, N., 19 Apr 2016, In : Development. 143, 8, p. 1328-1339 12 p.

Research output: Contribution to journalArticle

Open Access
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55 Citations (Scopus)
92 Downloads (Pure)
11 Citations (Scopus)

Comparison of drug release from poly(lactide-co-glycolide) microspheres and novel fibre formulations

Campbell, C. S. J., Delgado-Charro, M. B., Camus, O. & Perera, S., 1 Mar 2016, In : Journal of Biomaterials Applications. 30, 8, p. 1142-1153 12 p.

Research output: Contribution to journalArticle

Open Access
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2 Citations (Scopus)
169 Downloads (Pure)

Condensation and symmetry-breaking in the zero-range process with weak site disorder

Mailler, C., Morters, P. & Ueltschi, D., 1 Nov 2016, In : Stochastic Processes and their Applications. 126, 11, p. 3283-3309 22 p.

Research output: Contribution to journalArticle

Open Access
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3 Citations (Scopus)
116 Downloads (Pure)

Consumer perceptions of free-range laying hen welfare

Pettersson, I. C., Weeks, C. A., Wilson, L. R. M. & Nicol, C. J., 1 Aug 2016, In : British Food Journal. 118, 8, p. 1999-2013 15 p.

Research output: Contribution to journalArticle

Open Access
File
31 Citations (Scopus)
290 Downloads (Pure)
Open Access
13 Citations (Scopus)

Day-to-day population movement and the management of dengue epidemics

Falcon-Lezama, J., Velasco, M., Martinez, R., Castaneda, J. & Adams, B., 4 Oct 2016, In : Bulletin of Mathematical Biology.

Research output: Contribution to journalArticle

Open Access
File
6 Citations (Scopus)
137 Downloads (Pure)

Demographic noise can reverse the direction of deterministic selection

Constable, G. W. A., Rogers, T., McKane, A. J. & Tarnita, C. E., 9 Aug 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 32, p. E4745–E4754 32 p.

Research output: Contribution to journalArticle

Open Access
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44 Citations (Scopus)
142 Downloads (Pure)
Open Access
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23 Citations (Scopus)
129 Downloads (Pure)
Open Access
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1 Citation (Scopus)
146 Downloads (Pure)

Dynamik und räumliche Muster forstlicher Standorte in Deutschland. Ergebnisse der Bodenzustandserhebung im Wald 2006 bis 2008. Thuenen Report 43. Kapitel 12: Kronenzustand - Steuergrössen und Raum-Zeit-Entwicklung von 1989-2014

Translated title of the contribution: Dynamic and spatial pattern of soil under forest in Germany. Results of the national survey of soil under forest 2006 until 2008. Thuenen Report 43. : Chapter 12: The state of tree crowns - controlling factors and space-time trend between 1989 and 2014Eickenscheidt, N., Augustin, N. & Wellbrock, N., 2016, Thünen-Institut. 82 p.

Research output: Book/ReportOther report

Open Access

Efficient estimation and prediction for the Bayesian binary spatial model with flexible link functions

Roy, V., Evangelou, E. & Zhu, Z., Mar 2016, In : Biometrics. 72, 1, p. 289-298

Research output: Contribution to journalArticle

File
9 Citations (Scopus)
155 Downloads (Pure)

Equilibrium interbank lending networks

Xiao, D. & Krause, A., 2016, 2016 IEEE Congress on Evolutionary Computation (CEC). p. 4543-4550 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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110 Downloads (Pure)

Evidence for host-genotype associations of Borrelia burgdorferi sensu stricto

Mechai, S., Margos, G., Feil, E. J., Barairo, N., Lindsay, L. R., Michel, P. & Ogden, N. H., 1 Feb 2016, In : PLoS ONE. 11, 2, e0149345.

Research output: Contribution to journalArticle

Open Access
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20 Citations (Scopus)
277 Downloads (Pure)

Evolutionary genetics of maternal effects

Wolf, J. B. & Wade, M. J., 1 Apr 2016, In : Evolution. 70, 4, p. 827-839 13 p.

Research output: Contribution to journalArticle

Open Access
16 Citations (Scopus)

From empirical data to time-inhomogeneous continuous Markov processes

Lencastre, P., Raischel, F., Rogers, T. & Lind, P. G., 17 Mar 2016, In : Physical Review E. 93, 3, 032135.

Research output: Contribution to journalArticle

Open Access
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10 Citations (Scopus)
114 Downloads (Pure)

Front Propagation at the Nematic-Isotropic Transition Temperature

Majumdar, A., Milewski, P. A. & Spicer, A., 19 Jul 2016, In : SIAM Journal on Applied Mathematics. 76, 4, p. 1296-1320 25 p.

Research output: Contribution to journalArticle

Open Access
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4 Citations (Scopus)
97 Downloads (Pure)

Functional constraints on SoxE proteins in neural crest development: the importance of differential expression for evolution of protein activity

Lee, E. M., Yuan, T., Ballim, R. D., Nguyen, K., Kelsh, R. N., Medeiros, D. M. & McCauley, D. W., 1 Oct 2016, In : Developmental Biology. 418, 1, p. 166-178

Research output: Contribution to journalArticle

Open Access
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6 Citations (Scopus)
123 Downloads (Pure)

Generating power from transdermal extracts using a multi-electrode miniature enzymatic fuel cell

Du Toit, H., Rashidi, R. B., Ferdani, D. W., Delgado-Charro, M. B., Sangan, C. M. & Di Lorenzo, M., 15 Apr 2016, In : Biosensors and Bioelectronics. 78, p. 411-417 7 p.

Research output: Contribution to journalArticle

Open Access
16 Citations (Scopus)
46 Downloads (Pure)

Genetic structure within Septobasidium colonies suggests outcrossing and frequent non-self-fusion

Henk, D. A. & Vilgalys, R., 8 Sep 2016, In : Fungal Genomics and Biology. 6, 2, p. 143

Research output: Contribution to journalArticle

Open Access

Genomic variations leading to alterations in cell morphology of Campylobacter spp

Esson, D., Mather, A. E., Scanlan, E., Gupta, S., De Vries, S. P. W., Bailey, D., Harris, S. R., McKinley, T. J., Méric, G., Berry, S. K., Mastroeni, P., Sheppard, S. K., Christie, G., Thomson, N. R., Parkhill, J., Maskell, D. J. & Grant, A. J., 2 Dec 2016, In : Scientific Reports. 6, 38303.

Research output: Contribution to journalArticle

Open Access
11 Citations (Scopus)

Geographic variation in breeding system and environment predicts melanin-based plumage ornamentation of male and female Kentish plovers

Argüelles Ticó, A., Kupper, C., Kelsh, R. N., Kosztolányi, A., Szekely, T. & van Dijk, R. E., Jan 2016, In : Behavioral Ecology and Sociobiology. 70, 1, p. 49-60

Research output: Contribution to journalArticle

File
9 Citations (Scopus)
124 Downloads (Pure)

Global cooling as a driver of diversification in a major marine clade

Davis, K., Hill, J., Astrop, T. & Wills, M., 4 Oct 2016, In : Nature Communications. 7, p. 1-8 8 p., 13003.

Research output: Contribution to journalArticle

Open Access
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17 Citations (Scopus)
133 Downloads (Pure)

Household demographic determinants of Ebola epidemic risk

Adams, B., 7 Mar 2016, In : Journal of Theoretical Biology. 392, p. 99-106 8 p.

Research output: Contribution to journalArticle

Open Access
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4 Citations (Scopus)
286 Downloads (Pure)

Impacts of survival and reproductive success on the long-term population viability of reintroduced great bustards Otis tarda in the UK

Ashbrook, K., Taylor, A., Jane, L., Carter, I. & Székely, T., Oct 2016, In : Oryx. 50, 4, p. 583-592 10 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)

Implementation of normative practical reasoning with durative actions

Shams, Z., Vos, M. D., Padget, J. & Vasconcelos, W., 13 Jul 2016, Coordination, Organizations, Institutions, and Norms in Agent Systems (COIN), 2015 International Workshops, COIN@AAMAS, Istanbul, Turkey, May 2015, COIN@IJCAI, Buenos Aires, Argentina, July 2015, Revised Selected Papers. Dignum, V., Noriega, P., Sensoy, M. & Simao Sichman, J. (eds.). Springer International Publishing, p. 335-353 19 p. (Lecture Notes in Computer Science; vol. 9628).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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121 Downloads (Pure)

Improving weather forecasting accuracy by using r-adaptive methods coupled to data assimilation algorithms

Budd, C., Cullen, M. & Piccolo, C., 1 Jan 2016, UK Success Stories in Industrial Mathematics. Aston, P. J., Mulholland, A. J. & Tant, K. M. M. (eds.). Springer International Publishing, p. 11-18 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Input-to-state stability of discrete-time Lur'e systems

Logemann, H. & Sarkans, E., 31 Dec 2016, In : SIAM Journal on Control and Optimization. 54, 3, p. 1739-1768 31 p.

Research output: Contribution to journalArticle

Open Access
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10 Citations (Scopus)
121 Downloads (Pure)

InstAL: An Institutional Action Language

Padget, J., Elakehal, E., Li, T. & De Vos, M., 2016, Social Coordination Frameworks for Social Technical Systems. Springer Verlag, Vol. 30. p. 101 124 p. (Law, Governance and Technology Series ).

Research output: Chapter in Book/Report/Conference proceedingChapter

Open Access
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136 Downloads (Pure)

Instinct: a biologically inspired reactive planner for embedded environments

Wortham, R. H., Gaudl, S. & Bryson, J. J., 14 Jun 2016, Proceedings of the International Conference on Automated Planning and Scheduling (ICAPS): PlanRob Workshop 2016. 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
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104 Downloads (Pure)

Isolation and cultivation of naive-like human pluripotent stem cells based on HERVH expression

Wang, J., Singh, M., Sun, C., Besser, D., Prigione, A., Ivics, Z., Hurst, L. D. & Izsvák, Z., 1 Feb 2016, In : Nature Protocols. 11, 2, p. 327-346 20 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Limiting distribution of the rightmost particle in catalytic branching Brownian motion

Bocharov, S. & Harris, S. C., 4 Oct 2016, In : Electronic Communications in Probability. 21, 12 p., Paper no. 70.

Research output: Contribution to journalArticle

Open Access
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5 Citations (Scopus)
115 Downloads (Pure)

Localised pattern formation in a model for dryland vegetation

Dawes, J. H. P. & Williams, J. L. M., Jul 2016, In : Journal of Mathematical Biology. 73, 1, p. 63-90

Research output: Contribution to journalArticle

6 Citations (Scopus)

Measuring stratigraphic congruence across trees, higher taxa and time

O'Connor, A. & Wills, M., 30 Sep 2016, In : Systematic Biology. 65, 5, p. 792-811 20 p.

Research output: Contribution to journalArticle

Open Access
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6 Citations (Scopus)
124 Downloads (Pure)

Mesh adaptation on the sphere using optimal transport and the numerical solution of a Monge-Ampère type equation

Weller, H., Browne, P., Budd, C. & Cullen, M., 1 Mar 2016, In : Journal of Computational Physics. 308, p. 102-123 22 p.

Research output: Contribution to journalArticle

Open Access
12 Citations (Scopus)
52 Downloads (Pure)

Microevolutionary traits and comparative population genomics of the emerging pathogenic fungus Cryptococcus gattii

Farrer, R., Voelz, K., Henk, D., Johnston, S. A., Fisher, M., May, R. & Cuomo, C., 31 Dec 2016, In : Philosophical Transactions of the Royal Society B: Biological Sciences. 371, 1709, p. 1-11 11 p., 20160021.

Research output: Contribution to journalArticle

Open Access
15 Citations (Scopus)

Modularity and stability in ecological communities

Rogers, T., Allesina, S. & Grilli, J., 23 Jun 2016, In : Nature Communications. 7, 9 p., 12031 (2016).

Research output: Contribution to journalArticle

Open Access
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56 Citations (Scopus)
124 Downloads (Pure)

Multilayer asymptotic solution for wetting fronts in porous media with exponential moisture diffusivity

Budd, C. J. & Stockie, J. M., May 2016, In : Studies in Applied Mathematics. 136, 4, p. 424-458

Research output: Contribution to journalArticle

Open Access
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90 Downloads (Pure)

Mutation rate analysis via parent– progeny sequencing of the perennial peach. I. A low rate in woody perennials and a higher mutagenicity in hybrids

Xie, Z., Wang, L., Wang, L., Wang, Z., Lu, Z., Tian, D., Yang, S. & Hurst, L. D., 26 Oct 2016, In : Proceedings of the Royal Society B: Biological Sciences. 283, 1841, 20161016.

Research output: Contribution to journalArticle

Open Access
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21 Citations (Scopus)
116 Downloads (Pure)

Mutation rate analysis via parent- progeny sequencing of the perennial peach. II. No evidence for recombination associated mutation

Wang, L., Zhang, Y., Qin, C., Tian, D., Yang, S. & Hurst, L. D., 26 Oct 2016, In : Proceedings of the Royal Society B: Biological Sciences. 283, 1841, 20161785.

Research output: Contribution to journalArticle

Open Access
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3 Citations (Scopus)
141 Downloads (Pure)

Network innoculation: heteroclinics and phase transitions in an epidemic model

Yang, H., Rogers, T. & Gross, T., 22 Aug 2016, In : Chaos. 26, 083116.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Normative practical reasoning via argumentation and dialogue

Shams, Z., De Vos, M., Oren, N. & Padget, J., 31 Jul 2016, Proceedings of the 25th International Joint Conference on Artificial Intelligence (IJCAI), 2016. Kambhampati, S. (ed.). Palo Alto, U. S. A.: AAAI Press, p. 1244-1250 7 p. (Proceedings (IITA International Joint Conference on Artificial Intelligence)).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
File
2 Citations (Scopus)
39 Downloads (Pure)

On the reliability of unreliable information: Gossip as cultural memory

Mitchell, D., Bryson, J. J., Rauwolf, P. & Ingram, G., Oct 2016, In : Interaction Studies. 17, 1, p. 1-25 25 p.

Research output: Contribution to journalArticle

Open Access
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2 Citations (Scopus)
102 Downloads (Pure)

Pluripotency and the endogenous retrovirus HERVH: conflict or serendipity?

Izsvák, Z., Wang, J., Singh, M., Mager, D. L. & Hurst, L. D., 1 Jan 2016, In : Bioessays. 38, 1, p. 109-117 9 p.

Research output: Contribution to journalArticle

26 Citations (Scopus)

Purifying selection on exonic splice enhancers in intronless genes

Savisaar, R. & Hurst, L. D., Jun 2016, In : Molecular Biology and Evolution. 33, 6, p. 1396-1418

Research output: Contribution to journalArticle

Open Access
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10 Citations (Scopus)
138 Downloads (Pure)

Reports of the aaai 2016 Spring Symposium Series

Amato, C., Amir, O., Bryson, J., Grosz, B., Indurkhya, B., Kiciman, E., Kido, T., Lawless, W. F., Liu, M., McDorman, B., Mead, R., Oliehoek, F. A., Specian, A., Stojanov, G. & Takadama, K., 1 Dec 2016, In : Z Magazine. 37, 4, p. 83-88 6 p.

Research output: Contribution to journalArticle

Revising institutions governed by institutions for compliant regulations

King, T. C., Li, T., De Vos, M., Jonker, C. M., Padget, J. & van Riemsdijk, M. B., 13 Jul 2016, Coordination, Organizations, Institutions, and Normes in Agent Systems XI: COIN 2015 International Workshops, COIN@AAMAS, Istanbul, Turkey, May 4, 2015, COIN@IJCAI, Buenos Aires, Argentina, July 26, 2015, Revised Selected Papers. Dignum, V., Noriega, P., Sensoy, M. & Simao Sichman, J. (eds.). Springer International Publishing, p. 191-208 18 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9628).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Citations (Scopus)

Robot Transparency, Trust and Utility

Wortham, R. H., Theodorou, A. & Bryson, J. J., 4 Apr 2016. 3 p.

Research output: Contribution to conferencePaper

Open Access
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302 Downloads (Pure)

Robust set-point regulation for ecological models with multiple management goals

Guiver, C., Mueller, M., Hodgson, D. & Townley, S., 1 May 2016, In : Journal of Mathematical Biology. 72, 6, p. 1467-1529 63 p.

Research output: Contribution to journalArticle

Open Access
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2 Citations (Scopus)
107 Downloads (Pure)

Sampling diverse characters improves phylogenies: craniodental and postcranial characters of vertebrates often imply different trees

Mounce, R. C. P., Sansom, R. & Wills, M. A., 15 Mar 2016, In : Evolution. 70, 3, p. 666-686 21 p.

Research output: Contribution to journalArticle

Open Access
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13 Citations (Scopus)
140 Downloads (Pure)